Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00881 ATGATCCAGAACGCTGATATGAAACTCGAGTCAGGGACTTGTAACGTTTGCTCAGCTCCTTGTTCGTCCTGCATTCATCTTAGTCGAGCTCTCACTCGACCAAAGGCCAAAGAGTTCTCTGATGAAAATTGTCACTTGGGGGAGGCCAATCAGTTTTCTACGGATGAGGGTGATCAATCTTCTCGTAGGAGCAGAACTTGTGAAAGATTGAATCATGCTAGCAGTGGAACCGGTAACATGCTTAGTGTTAATTCCAGTCATGAATCTCTGTCTGAAAATGCTGAAAGCACACGAGTTTTATCAGAGAAGTACCGGGATGCCAAATTTTTAGAAGGTCTTGATGACAATGCTTCTTGTATCAGTAGAACCAGTGATGCTGATTTAATACCTGTTATTAATGGCAATACTGCTGTGCTTTCGACAAGAGTATATCCAAAGTCAGAATCAGATTCAGATAGTGATGTTGGTAATGTGAAAGACAAAAATCATAAAGTTCCAGTCCGTGATGGACTGCATGAGAAGCAAGGGGAGCAGGTTAAATCACCAGTCAAGCCTGAAGCTCACTCTGAAGATGAGAGTGATGACTCAGATGTTGAGCATGATGTAAAAGTTTGTGACATCTGTGGGGATGCTGGTCGGGAGGAGCTGCTTGCAGTATGTAGCAGGTGCAGTGATGGTGCAGAGCACACCTATTGCATGCGAGAAATGCTTGAAAAGGTTCCAGAAGGAGACTGGTTATGTGAAGAATGCAAGTATGCTCAGGAGACTGAAAATCAAAAGCTGGGTAAAATTAATTCAACTGCACTTATCTCTGGAAAAAGGCCTCTTGAAAGTGAAGAATTGGCTAAGGCAGCAAAAAAGCAAGATCTTGAGTCAAACATTGGGTCACCAAAGGGTTCAAGCCCCAAGAGAGTATTTCCACTGTCACGAGAGTCTTCATTCAAGAACCTTGATAAGGGAAAGTTGAAGTCTGGTTACCACAGCTCCATTTGTAATCACCCTGATGGCAGTGACAGAGAACTTGCTCGCTCTCTTTCAGCTGGTCCTCGAAGTCAAACAACAAAGAGTACATTGTTGAAGTCAAATTCATTCAATACGAATTCCAACCCAAGAGTCAAACTTGTTGATGAAGTCCCGCAAAAGAAGAAAGGGGGCAGCGAACATGCTTCTAAGGATAGCGAGGCACCAAGGCAAATAATTAGCAAATCTACATCATTCAAATCATCAAATTTGAGCAGTTCGAATGCCACTGAATCAAAAGTTAAAATGCTTACTTCTAAGTCTGGAACAACACAGGACCTGAAAGGATCAAGACTAACAAAAGAATCTGACAGGAAATTTCTCTCTAGGGTTGATCAGCCTGTGGTTTGTTCAACCATTTCCAAACCTATAGGTGACCATAAGCTTTCTCCTCATGGTGAGACCAGTAAACCTTCTGCAGTTAACAATCGAGAGCGTAAGGTCAACCCAGATGTGAGATCAAATTCATTATCTAAGTCTAAGAATAATATAAACCGCAAGAGTTCGGCACCTTTATTTAGTGCAGAAAGAATAGCAACCAGTGGTGAAGAAACTCAATTGGATGGGGCGCCTCAATCAATAGAATTTTCAAATCAAATTGATAATGCCAAAGATAGTTCTATTGATCATGTGAGCTCTGGTCTTACTAATGCTTCTGGAAGCTCAGTCTTTCACAAAAGTAAGGATTTTGGCCATGCAACAGAATGTCGTGGGGTTGCTAATAGAGAAGAATTCAGCCTCGAAGGATCAACCACTGCCCCAAACAGTTCAAAAGACAAGATACATAAAGATAATAGACTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGGCCTGAAATATGCAAGAAGAAAGAAGTACCTGATCGAACTGATGAATTTTCTACATCAGGCAGAGACTTGAATTCCGAAGTCAGTTCTCAGGATCAGTCGATTGTTATCAACACACAAAAGAATATTCTTTCTACTGAAGAAACAAAAGCGAGGCAGGAGATCCTTCACAACCCAACATTTGAAACTCCATCTTCCAATGGTTCGAAGCCAGTTAGCTTTGGTCCAATACAGCCAAGAAAGTTAGAATCTGTTGGTCCTGATCCTGGAAATCCTGTAGTGAGAGATTTCCAGAATCAAGCTTTGGCTGTCTCAAGTGTTCTTTCACAGATAGCAGTCTTTCCAGAACATCAATTCATCTGGCAAGGTGTCTTTCAAGTGCACAGATATGGAAAGCTACCTAACTTGTATACTGGAATTCAAGCACATTTATCCACATGTGCATCCCCCAAGGTTCTTGAGGTAGTGAACAAGTTTCTACCTGAAGTTTCCCTCGATGAAGTTTCTCGCTTGAGCACTTGGCCTTCACAATTTCATCAAGGCGGGGCTAGGGAAGATAATATCGCTCTTTACTTTTTTGCCGAAGACATTGAAAGTTATAGGAGACACTACAAGGGTCTACTGGATCACATGATTAGAAATGATTTAGCACTTAAAGGAAGTTTTGATGGTGTTGAACTTCTCATATTCCCATCTAATCAGCTTCCTGAAAATTCTCAGCGTTGGAATATGCTGTTTTTCTTATGGGGTGTATTTAGAGGACATAGGATGAATAATTTTGACTCTGCAAGAAAGGTTTGTATTCCCAGTTTGAACGCGGTGCCAGTTGAGAAGGATTTTCCAACTTCTGTCATGAATTTGTCTGAAACCCACAGCTCACTGAAGCGGATGGATGAACAATCAATTGCTTGTGGTAGAACATGCAGTGCAGTTCTCCCTTCCACTTCCATAGGTGAAGGCCCTAATGTTTTCCATGGGGATTTTGATATCAAAGAAACTAGTGATGAGGCATGTTTGGCTTCACAAGTAAACTTACATAGGCAAGATAGTAGAATCAACACTAAATCTACATTGGAGATTCCTTCAAGCAGTGGTCAGTTGTGCCAAGAATTGCATTCCGCAGGTTCATCCCCGAAAGATGGACAGCAGAGAGTCCCCACACCTCCTGAAGCAATGAGAACACTTGTAAGTAACTGGATTGTGGAAACAAATAGTGACTATGATATTTCAGTCAAGCAAGAGAACTCTCTGTCTTCAGGGATTCCTTCTGCCGAGAAACAAGAGACAGATGCTGCAAGCAATACCTCTGAAAATCAAATTTCAGAGAGAATTAACCATGATGAAGATCAACATAGGCCTAAAAGGAAACTGATAGAAGAAGATCTCAATATTAGCATAGAGGCAACGCTTCAAGAAGACCCATCTATAACAATCATAAACTGTCAGCAAACTAATGATAAAAAAGTTCAGCATATAGATGTTTCAAATGCAGTTTTGAAGGCTTCCACAGATAGTTATCAGAAATTGCCTTGGGATAAGGTGAATGGGAAATTGGAAGATGGAGAAAGTTCCAGCAAGAAGCTCAAGTCAGGTTTAACTGATATTTATGGAAGTTGTAGTTCAGGAGGTAGGGAATCTTCCAATGGCAGTTTTACGGCCCGTGCAAACCATCCTGGTACCTTCTCTTCAGTTGAGGACCTTGGAACCATGGAAAGAACCTTCTTTCCTGTTGATTCGCATAAGAAAAATGACTCGCAATTGATGCTCAACGGCATGCCACTGGAGGGGTCTTGTGAGTATGAGGGTCAATTTCAAGTTGGGATTCCAAATCTAGAGCTTGCTTTGGGGGGCAAAATAAAACCACAGCCACTGCCAGTTCCAGCGCCGCCCCATAAGGGTATTCATCGAATAAGGAACCTGTCAAACCTGCTCCAAAAGCTGAACATTCGACTGATGGGCATCATGTGA 3819 0.4179 MIQNADMKLESGTCNVCSAPCSSCIHLSRALTRPKAKEFSDENCHLGEANQFSTDEGDQSSRRSRTCERLNHASSGTGNMLSVNSSHESLSENAESTRVLSEKYRDAKFLEGLDDNASCISRTSDADLIPVINGNTAVLSTRVYPKSESDSDSDVGNVKDKNHKVPVRDGLHEKQGEQVKSPVKPEAHSEDESDDSDVEHDVKVCDICGDAGREELLAVCSRCSDGAEHTYCMREMLEKVPEGDWLCEECKYAQETENQKLGKINSTALISGKRPLESEELAKAAKKQDLESNIGSPKGSSPKRVFPLSRESSFKNLDKGKLKSGYHSSICNHPDGSDRELARSLSAGPRSQTTKSTLLKSNSFNTNSNPRVKLVDEVPQKKKGGSEHASKDSEAPRQIISKSTSFKSSNLSSSNATESKVKMLTSKSGTTQDLKGSRLTKESDRKFLSRVDQPVVCSTISKPIGDHKLSPHGETSKPSAVNNRERKVNPDVRSNSLSKSKNNINRKSSAPLFSAERIATSGEETQLDGAPQSIEFSNQIDNAKDSSIDHVSSGLTNASGSSVFHKSKDFGHATECRGVANREEFSLEGSTTAPNSSKDKIHKDNRLKAAIQAALLRRPEICKKKEVPDRTDEFSTSGRDLNSEVSSQDQSIVINTQKNILSTEETKARQEILHNPTFETPSSNGSKPVSFGPIQPRKLESVGPDPGNPVVRDFQNQALAVSSVLSQIAVFPEHQFIWQGVFQVHRYGKLPNLYTGIQAHLSTCASPKVLEVVNKFLPEVSLDEVSRLSTWPSQFHQGGAREDNIALYFFAEDIESYRRHYKGLLDHMIRNDLALKGSFDGVELLIFPSNQLPENSQRWNMLFFLWGVFRGHRMNNFDSARKVCIPSLNAVPVEKDFPTSVMNLSETHSSLKRMDEQSIACGRTCSAVLPSTSIGEGPNVFHGDFDIKETSDEACLASQVNLHRQDSRINTKSTLEIPSSSGQLCQELHSAGSSPKDGQQRVPTPPEAMRTLVSNWIVETNSDYDISVKQENSLSSGIPSAEKQETDAASNTSENQISERINHDEDQHRPKRKLIEEDLNISIEATLQEDPSITIINCQQTNDKKVQHIDVSNAVLKASTDSYQKLPWDKVNGKLEDGESSSKKLKSGLTDIYGSCSSGGRESSNGSFTARANHPGTFSSVEDLGTMERTFFPVDSHKKNDSQLMLNGMPLEGSCEYEGQFQVGIPNLELALGGKIKPQPLPVPAPPHKGIHRIRNLSNLLQKLNIRLMGIM 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00881 1272 MobiDBLite consensus disorder prediction 284 511 - -
Adu03g00881 1272 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 187 272 IPR013083 -
Adu03g00881 1272 SUPERFAMILY FYVE/PHD zinc finger 190 257 IPR011011 -
Adu03g00881 1272 MobiDBLite consensus disorder prediction 143 198 - -
Adu03g00881 1272 MobiDBLite consensus disorder prediction 974 1005 - -
Adu03g00881 1272 MobiDBLite consensus disorder prediction 396 436 - -
Adu03g00881 1272 MobiDBLite consensus disorder prediction 974 1000 - -
Adu03g00881 1272 PANTHER - 135 1078 - -
Adu03g00881 1272 PANTHER - 7 129 - -
Adu03g00881 1272 PANTHER - 1080 1239 - -
Adu03g00881 1272 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 135 1078 - -
Adu03g00881 1272 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1080 1239 - -
Adu03g00881 1272 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 7 129 - -
Adu03g00881 1272 SMART PHD_3 204 251 IPR001965 -
Adu03g00881 1272 MobiDBLite consensus disorder prediction 1031 1069 - -
Adu03g00881 1272 MobiDBLite consensus disorder prediction 467 492 - -
Adu03g00881 1272 MobiDBLite consensus disorder prediction 1031 1057 - -
Adu03g00881 1272 MobiDBLite consensus disorder prediction 627 649 - -
Adu03g00881 1272 MobiDBLite consensus disorder prediction 375 395 - -
Adu03g00881 1272 MobiDBLite consensus disorder prediction 70 94 - -
Adu03g00881 1272 MobiDBLite consensus disorder prediction 147 191 - -
Adu03g00881 1272 MobiDBLite consensus disorder prediction 493 510 - -
Adu03g00881 1272 MobiDBLite consensus disorder prediction 346 373 - -
Adu03g00881 1272 ProSiteProfiles Zinc finger PHD-type profile. 202 253 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00881 Adu-Chr3 8736131 8743220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00881 205 298 Core DNA Replication Machinery Family AT4G14700 29.787 5.24e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00881 - - ahf:112789342 2435.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00881 03 8736131 8743220 Adu05g01231 05 17820583 17829353 ECH
Adu03g00881 03 8736131 8743220 Adu03g00881 03 8736131 8743220 ECH