Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00878 ATGACAAGCACCTCTCAAGTTATTACATGCAAAGCTGCAGTATGTTGGAAGGTTGGAGAGGGAGTGAAGGTTGAAGAGATTCAAGTTGATCCACCAAAAGCAAATGAAGTTCGACTTAAGATGCTTTGTTCTAGCATCTGCCACACTGATATCTCAAGCATTCAAGGATCTCCGATGTTTAATTTTTATCCTCTAGCACTTGGACATGAAGGAGTTGGGGTTGTAGAAACTGTTGGGGATGAAGTCAAGAGTGTGAAAGAAGGCGATACAGTGATTCCAACATACATAGAAGAGTGCCAAGAATGTGAGAATTGCATTTCAGGGAAATCAAATTTGTGCATGACATGTCCTGTGAGGCTGACTGGCTTGATGCCAGATAACACTTCAAGGATGTCCTGCAGAGGCCAGAGGCTATACCACCCTTCGAGTTGTGCCACGTGGTCCGAATACACGGTTATTGATGCTAAATTGCTCGTCAAAGTTGATCCAAGCATTGATCCAGCCCATGCCAGTTTCATCTCATGTGGGTTCTCAACTGGCTATGGAGCTGCATGGAAGGAAGCCAAGGTTGAAAGTGGATCAAGTGTTGCTGTCTTTGGTCTTGGTGCTGTTGGATTAGGGGCTATAAGTGCAGCAAAAATATTGGGGGCAACAAAGATAATAGGGATTGACATAAATGATATGAAGAGAGAAAAAGGTGAAGCTTTTGGAATGACTCACTTTATAAATCCAAGTGATTCTGATAAATCTTCTTCAGCATTGGTGAAGGAACTTAGTGGTGGAATGGGTGTGGATTATTCCTTTGAGTGCACTGGAGTTGACCCTTTGCTTACTGAATCATTAGAAGCTACAAAAGTGGGTTCAGGTAAAACAATAATACTTGGTTTAGGAAATGAACCATATGTATCATTAGGTCTGTTTACTATTGCTTTTGGGAGAACTTTGAAAGGGTCGATGTTTGGTGGGCTAAAACCAAAATCGGACCTGCCTATCCTAGCTGACAAATGCATTAATCAGGAATTTCCTCTTCAAGAACTATTCACCCATGAGGTCCAATTAACAGATATAGAACAAGCATTTGAGCTATTGAAACAACCCAATTGTGTGAAAGTTGTCATCAAGATATAA 1128 0.4131 MTSTSQVITCKAAVCWKVGEGVKVEEIQVDPPKANEVRLKMLCSSICHTDISSIQGSPMFNFYPLALGHEGVGVVETVGDEVKSVKEGDTVIPTYIEECQECENCISGKSNLCMTCPVRLTGLMPDNTSRMSCRGQRLYHPSSCATWSEYTVIDAKLLVKVDPSIDPAHASFISCGFSTGYGAAWKEAKVESGSSVAVFGLGAVGLGAISAAKILGATKIIGIDINDMKREKGEAFGMTHFINPSDSDKSSSALVKELSGGMGVDYSFECTGVDPLLTESLEATKVGSGKTIILGLGNEPYVSLGLFTIAFGRTLKGSMFGGLKPKSDLPILADKCINQEFPLQELFTHEVQLTDIEQAFELLKQPNCVKVVIKI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00878 375 Gene3D - 180 318 - -
Adu03g00878 375 Pfam Zinc-binding dehydrogenase 203 322 IPR013149 -
Adu03g00878 375 PANTHER ALCOHOL DEHYDROGENASE 5 374 - -
Adu03g00878 375 PANTHER ALCOHOL DEHYDROGENASE-RELATED 5 374 - -
Adu03g00878 375 SUPERFAMILY GroES-like 4 191 IPR011032 -
Adu03g00878 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 337 IPR036291 -
Adu03g00878 375 Pfam Alcohol dehydrogenase GroES-like domain 35 161 IPR013154 -
Adu03g00878 375 SMART PKS_ER_names_mod 19 373 IPR020843 GO:0016491
Adu03g00878 375 CDD liver_alcohol_DH_like 8 374 - -
Adu03g00878 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Adu03g00878 375 Gene3D - 14 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00878 Adu-Chr3 8706313 8708626 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00878 35 367 Monolignol Biosynthesis Gene Families AT2G21730 27.003 3.10e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00878 K00121 - gmx:100798341 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00878 03 8706313 8708626 Adu03g00878 03 8706313 8708626 ECH