Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00872 ATGGGAGGTGGATTCAATGAAGAATATGGAGGAATAACAATGGAAGAAGAAGAAGAGAAGAATAAGTGGCCACCATGGCTGAAACCACTTCTGAAAACAAGCTTCTTTGTTCAATGCAAAGTCCATCAAGATTCTCATAAGAGTGAATGCAACATGTATTGTTTGGATTGTGTTAATGGTGCTCTTTGTTCTGCATGTCTGGCTTCACACAAAGATCATAGAACAATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGAGTGTCTGAGATTCAGAAATTTCTGGACATAACAGGGGTCCAAACCTACATTATTAACAGTGCCAAGATTGTGTTCTTGAATGAGAGGCCTCAACCCAGGCCTGGAAAAGGTGTAACCAACACCTGCCAAGTTTGTGAGCGCAGCCTCCTTGATTCCTTCAATTTCTGCTCACTTGGTTGTAAGATTGTTGGAACCTCCAAGAAATTCAGGAAGAAGAGAATGTTGGGGGAGACAGATGGTTCTTCAGATGGAGAAGGGTCAATGAATGGCATTGGCAATGGAAGTGCTAGGAACAAAATAATCCAAAGTTTTACGCCTTCGACGCCACCGCCGACGGCGGTCAACTACAGAACTTCTTCCAAGAGAAGGAAAGGAGTTCCACATAGATCTCCAATGGGGGGAGGACTTATAATAGAATACTAA 687 0.425 MGGGFNEEYGGITMEEEEEKNKWPPWLKPLLKTSFFVQCKVHQDSHKSECNMYCLDCVNGALCSACLASHKDHRTIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFNFCSLGCKIVGTSKKFRKKRMLGETDGSSDGEGSMNGIGNGSARNKIIQSFTPSTPPPTAVNYRTSSKRRKGVPHRSPMGGGLIIEY 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00872 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 223 - -
Adu03g00872 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 223 - -
Adu03g00872 228 CDD Bbox2 39 78 - -
Adu03g00872 228 MobiDBLite consensus disorder prediction 170 207 - -
Adu03g00872 228 MobiDBLite consensus disorder prediction 162 228 - -
Adu03g00872 228 Pfam PLATZ transcription factor 79 150 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00872 Adu-Chr3 8606266 8608882 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Adu03g00872 PLATZ 3.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00872 - - gmx:100810757 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00872 03 8606266 8608882 Adu05g01228 05 17764384 17766770 ECH
Adu03g00872 03 8606266 8608882 Adu03g00872 03 8606266 8608882 ECH