Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00864 ATGACTATAATCGCCGCAGATTGGAAGGATCGTGCCAGAGAAACCCGCGAGTTGAGTTTGGTAGCGCGCCAACCAAGAGCGGGAGCACAGTCGAGAAATATCAAGGAAGAACCCACCCAGTTCCAACATCACAACATTCTTACAAGTGTGAAAATGGGGAGATCACGAAGTGGTTATGATGAGAGTGGGTTGAAGAAAGGTCCATGGACACCGGAAGAGGATAGAATATTGGTGGATTACATAAACAAAAACGGCCATGGAAGTAATTGGCGAGCGCTTCCTAAGATTGCAGGTTTAAACAGATGTGGAAAGAGTTGCAGGCTGAGGTGGACTAACTACCTCAGGCCTGATATCAAGAGAGGAAAATTCTCTCAAGAAGAAGAGAAACTCATCATCAACTTACATCAACTTCTTGGCAATAAGTGGTCAGCAATAGCAAGTCATCTACCAGGAAGAACTGACAATGAAATCAAGAATTTCTGGAACACTAATCTTAGAAAGAAGCTTCTAAGAATGGGGTTAGATCCAGTGACTCATCGTCCAAGATTAGATCATAATCATAATCATAATCAACTTCAACTTCTTTCCAATCTTCAACACTTGCTTCTTGCTGCAAACATTCTCAACAATAACAACAATAATAATGCTCTATTAAGTACTCTTCTTATTAACTCTGATAATGCCAAACTCCAAATCCTCCAAAATATGCTTCAAATCCTTGCTACTACTACTACTAATAATAATAATCTTGCACCAAACTTGGAGCCACTACTCAATCATCAACAATTTGGTCCATTAACCTCATCATCATCATCATCATCAGTTCCAAATGGTTTTTATGAATCTTTAGGGTTGAATGAATCTATGCTCCAAAACCTTATTTGCAGTAATGATTCTTTCCCTTGTCAAAATCAGCCCAATTTCCAAAACTTTGAAGCTCCTCCTCATGATGATAATGTTAATAATAATAATGAGAAAGTTGTTGTTGATGGCACAAATTCTTCTTCTCCTACAACACCATTGAATTGTTATTCACTTCCAAATCTGGTTTCAGCCTCATCACCTCATCATGCATGTTCCAACAAAGTAAATAATAATAATAATAATAATAATAATAATAATAATAATACACATCATAGATCAAGAATCTAA 1152 0.3724 MTIIAADWKDRARETRELSLVARQPRAGAQSRNIKEEPTQFQHHNILTSVKMGRSRSGYDESGLKKGPWTPEEDRILVDYINKNGHGSNWRALPKIAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEKLIINLHQLLGNKWSAIASHLPGRTDNEIKNFWNTNLRKKLLRMGLDPVTHRPRLDHNHNHNQLQLLSNLQHLLLAANILNNNNNNNALLSTLLINSDNAKLQILQNMLQILATTTTNNNNLAPNLEPLLNHQQFGPLTSSSSSSSVPNGFYESLGLNESMLQNLICSNDSFPCQNQPNFQNFEAPPHDDNVNNNNEKVVVDGTNSSSPTTPLNCYSLPNLVSASSPHHACSNKVNNNNNNNNNNNNNTHHRSRI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00864 383 SUPERFAMILY Homeodomain-like 63 161 IPR009057 -
Adu03g00864 383 MobiDBLite consensus disorder prediction 309 337 - -
Adu03g00864 383 ProSiteProfiles Myb-like domain profile. 61 114 IPR001005 -
Adu03g00864 383 MobiDBLite consensus disorder prediction 354 383 - -
Adu03g00864 383 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 53 374 - -
Adu03g00864 383 CDD SANT 68 114 IPR001005 -
Adu03g00864 383 ProSiteProfiles Myb-like domain profile. 115 165 IPR001005 -
Adu03g00864 383 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 53 374 - -
Adu03g00864 383 Pfam Myb-like DNA-binding domain 66 114 IPR001005 -
Adu03g00864 383 Pfam Myb-like DNA-binding domain 120 165 IPR001005 -
Adu03g00864 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 114 IPR017930 -
Adu03g00864 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 115 169 IPR017930 -
Adu03g00864 383 CDD SANT 122 165 IPR001005 -
Adu03g00864 383 Gene3D - 59 119 - -
Adu03g00864 383 Gene3D - 122 169 - -
Adu03g00864 383 SMART sant 119 167 IPR001005 -
Adu03g00864 383 SMART sant 65 116 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00864 Adu-Chr3 8510497 8517649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00864 52 310 MYB Transcription Factor Family AT5G16770 54.647 4.19e-80 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu03g00864 Myb_DNA-binding 1.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00864 K09422 - gmx:547488 285.804