Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00846 ATGATCCTACTCCCAAACTCTCCAGAATTCGTGTTCTCCTTTTGGGCTGCTTCTATGCTTGGTGCAGTTTCCACCACTGCCAACCCTTCTTACACCTCCGTTGAAATCACAAAGCAGCTCAAAGCCTCCAAGGCCAAAATCGTCATTACACGTTCCATGCACGTGCACAAGCTCAAACAAGAAGAAGAAAACACCTTTATAGTGATAACTGTAGACAAACCACCAGAGAACTGCATGAGTTACTCGGTGGTTTCCAGCATGGAAGGGAAGCTGCCGGAGGTGGATATCGACCCTGACGACATGGTGGCACTGCCATTTTCCTCCGGCACGACGGGGCTGCCGAAGGGTGTGGTTCTGACACACAGAAGTCTGATAACAAACGTGGCTCAACAAGTTGAGGGAGAGAACCCTAACTTGCACCTGAAGGAAGAGGATGTAGTGCTTTGCGTTCTACCATTGTTTCACATTTACGCACTACACTCGGTGATGTTGTGCTCTATGAGAGTAGGGTGTAGGGTGTTGCTTATGGAGAAGTTTGAGATGAGGGTGATGTTGGAGCTTGTGGAAAAGCACAGGGTTTCGGTTTTGATGGCAGTACCGGCTTTGGTGGCGGCACTTTCAAAGAACCCCGCGGTGGAGGAGTATGACCTTAGGTCCATGCGGATGGTGATGTCGGGAGGTGCCCCACTTGCAGAGGATATTGAGGAGGCTTTTCATAGTAGATTGCCTCAAGCAATCCCTCGACAGGCTTTAGGAATGACAGAATCAGGACCCGTAATATCAATGTCATTAAGTTTTGCAAAGAATCCAATGACAACCAAGTTAAGGTCATGCGGCACTGTTATTAGAAATGCGGAGTTGAAGATCATTGATCTTTTGACTGGCTCTTCTCTCTCTTATAATACTTCGGGTGAGATTTGCATCCGCGGTCAACAGATTATGAAAGGATACTTGAATGATGAGAGGGCCACAGCAGAAGCTATTGATGAAGAGGGTTGGCTTCATACCGGTGATATTGGCTATGTTGATGATGATGATGAGATTTTCATTGTTGATAGACTCAAGGAACTCATCAAATTTAAAGGCTTCCAGGTGGCTCCGGCAGAACTTGAAGGAATTCTCATGAGCCACCCTTCCATTGAAGACGCAGCTGTTGTCCCGCAAAAAGATGATGTAGCGGGTGAAGTTCCAGTTGCTTTTGTGGTGAGGTCATCAAATGATCCTATTACTGAGGATGCTATAAAGGACTTTATAGCTAAACAGGTAGTGTTTTACAAGAGGCTACATAGAATAATTTTCATTGACGCAATCCCAAAATCTTCAATCGGCAAGATATTAAGAAAAGAACTCAAAGCAACCCTATCTAATTAG 1371 0.4559 MILLPNSPEFVFSFWAASMLGAVSTTANPSYTSVEITKQLKASKAKIVITRSMHVHKLKQEEENTFIVITVDKPPENCMSYSVVSSMEGKLPEVDIDPDDMVALPFSSGTTGLPKGVVLTHRSLITNVAQQVEGENPNLHLKEEDVVLCVLPLFHIYALHSVMLCSMRVGCRVLLMEKFEMRVMLELVEKHRVSVLMAVPALVAALSKNPAVEEYDLRSMRMVMSGGAPLAEDIEEAFHSRLPQAIPRQALGMTESGPVISMSLSFAKNPMTTKLRSCGTVIRNAELKIIDLLTGSSLSYNTSGEICIRGQQIMKGYLNDERATAEAIDEEGWLHTGDIGYVDDDDEIFIVDRLKELIKFKGFQVAPAELEGILMSHPSIEDAAVVPQKDDVAGEVPVAFVVRSSNDPITEDAIKDFIAKQVVFYKRLHRIIFIDAIPKSSIGKILRKELKATLSN 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00846 456 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 452 - -
Adu03g00846 456 ProSitePatterns Putative AMP-binding domain signature. 104 115 IPR020845 -
Adu03g00846 456 PANTHER 4-COUMARATE--COA LIGASE 3 1 452 - -
Adu03g00846 456 SUPERFAMILY Acetyl-CoA synthetase-like 2 454 - -
Adu03g00846 456 Pfam AMP-binding enzyme 2 360 IPR000873 -
Adu03g00846 456 Gene3D - 1 354 IPR042099 -
Adu03g00846 456 Gene3D - 355 456 IPR045851 -
Adu03g00846 456 Pfam AMP-binding enzyme C-terminal domain 369 444 IPR025110 -
Adu03g00846 456 CDD 4CL 1 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00846 Adu-Chr3 8312348 8327215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00846 1 386 Monolignol Biosynthesis Gene Families AT3G21240 58.779 1.87e-172 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00846 K01904 - qsu:112026275 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00846 03 8312348 8327215 Adu03g00846 03 8312348 8327215 ECH