Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00840 ATGGGAATGCGACCCCGTAAATCGGGTGAGGAGGGACAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGCTGCCAGGCTGTGGAACCACGGGTTCAGGACAATCGGGGTCGACTAGTAAGAGTGCTGGGTTGGCAACGCCAGCTGGTGATAGCACCTGTCTCAAATTAGACCATCTTGACATACAAGGCGATGATGCTGGATCGCAGGGGCCAGTTGGTAGCAAGAAGAAAAAGAGAGGTCAACGGGCAGTTGGACCTGATAAAAGTGGAAGAGGGCTCCGTCAATTTAGTATGAAAGTTTGTGAGAAGGTAGAAAGCAAGGGAAGAACAACTTACAATGAGGTAGCAGATGAACTTGTGGCTGAATTTGCTGATCCAGGCAACAGTGATTTGTCTCCTGATCAGCAACAATATTATGAGAAAAATATCCGTAGAAGGGTCTATGATGCTCTGAACGTTCTCATGGCAATGGATATTATTTCAAAGGATAAAAAGGAAATACAATGGAAGGGTCTTCCTCGTACTAGTGTGAACGATATTGAAGAACTAAAGTCAGAACGTCTTGTGCTCAGGAGTAAAATTGAGAAGAAAACAGCATATTTGCATGAGCTGGAGGAGCAAGTAAAAAACCCTCCCAGTGGTGTATCTTTACCTTTTATTCTGGTACAGACACGTCCTCATGCAACTGTTGAAGTGGAAATATCAGAAGATATGCAGCTTGTGCATTTTGATTTCAATAGTACTCCTTTTGAGCTGCATGATGACAACTATGTGCTAAAGGCAATGAAGTTCTGTGGGAGACCACAGAGTGATAATACGACACACAATCTTGCCGATGGAGGTGAAGGTTCTAGCATGTCAGGCTTGAATCAGTCACAAGTTCCTCCTTCAGTTACGAATCTTCCAGCTAGGCCTCCCACATCACCTCCACTCCCTGGGATATTGAAGGCAAGAGTTAAGAATGAGCCTTAA 972 0.4527 MGMRPRKSGEEGQEEEEEEEEEELPGCGTTGSGQSGSTSKSAGLATPAGDSTCLKLDHLDIQGDDAGSQGPVGSKKKKRGQRAVGPDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPGNSDLSPDQQQYYEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSVNDIEELKSERLVLRSKIEKKTAYLHELEEQVKNPPSGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCGRPQSDNTTHNLADGGEGSSMSGLNQSQVPPSVTNLPARPPTSPPLPGILKARVKNEP 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00840 323 Gene3D Transcription factor DP 206 280 IPR038168 -
Adu03g00840 323 PANTHER TRANSCRIPTION FACTOR DP 33 322 - -
Adu03g00840 323 MobiDBLite consensus disorder prediction 1 94 - -
Adu03g00840 323 SUPERFAMILY E2F-DP heterodimerization region 178 275 IPR037241 -
Adu03g00840 323 Pfam Transcription factor DP 179 275 IPR014889 -
Adu03g00840 323 MobiDBLite consensus disorder prediction 272 323 - -
Adu03g00840 323 PIRSF Txn_factor_DP 207 323 IPR015648 GO:0005667|GO:0051726
Adu03g00840 323 PIRSF Txn_factor_DP 6 211 IPR015648 GO:0005667|GO:0051726
Adu03g00840 323 Gene3D - 84 178 IPR036388 -
Adu03g00840 323 Pfam E2F/DP family winged-helix DNA-binding domain 91 171 IPR003316 GO:0005667|GO:0006355
Adu03g00840 323 PANTHER TRANSCRIPTION FACTOR DP 33 322 IPR015648 GO:0005667|GO:0051726
Adu03g00840 323 CDD DP_DD 176 262 IPR014889 -
Adu03g00840 323 MobiDBLite consensus disorder prediction 28 46 - -
Adu03g00840 323 MobiDBLite consensus disorder prediction 272 298 - -
Adu03g00840 323 SMART DP_2 178 321 IPR014889 -
Adu03g00840 323 SUPERFAMILY "Winged helix" DNA-binding domain 91 172 IPR036390 -
Adu03g00840 323 SMART E2F_TDP_2 88 171 IPR003316 GO:0005667|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00840 Adu-Chr3 8235697 8238799 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00840 72 263 E2F-DP Transcription Factor Family AT5G02470 52.381 2.65e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Adu03g00840 DP 2.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00840 K04683 - jre:108988357 464.151