Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu03g00781 | ATGATTGATATGGGTTCTTCATCAGTAATAGAAGGTGAAGTTACACTTCCAGGATTCAGGTTTCACCCTACTGAAGAAGAGCTCCTTGATTTCTATCTCAAGAACATGGTCGTTGGAAAGAAGCTCCGTTTCGATGTCATCGGCTTCCTCAACATCTATCACCATGATCCCTGGGACTTGCCAGGATTGGCTAAAGTGGGAGAGAGGGAATGGTATTTCTTTGTGCCTCGGGACAGAAAGCATGGCACCGGGGGAAGGCCAAACCGGACCACCGAGAAAGGGTTCTGGAAAGCAACCGGTTCCGACCGTAAGATCGTTACCTTGTCTGATCCGAAGCGCATAATTGGATTGAGGAAGACACTGGTTTTCTATGAGGGAAGAGCTCCACGTGGATCCAAGACCGATTGGGTCATGAATGAGTACCGTTTACCTGACAATTGCCCCTTGCCTAAGGACATAGTGTTATGCAAGATATATAGGAAGGCGACTTCGTTGAAAGTGTTGGAGCAAAGAGCAGCAATAGAGGAAGAGATGAAGCAAATGGTAGGTTCCCCTGAATCCACACCTTCCTCCACAGACACCATGTCCTATGAAGAACAACAACAGAATCAGAATCAGAATCAGAATCTGCAATTGTTACCACCACAACATGTTGTTACTAAGAAAGAGGTTGAAGCTGAACTTGAAGAGGAAAAAATGGTACATGTTACATTGGCAACAACAAAGCAAGAAAACAAGGACACAACAAAGAACAATAAAAGTAGTTGTTGTGGTAACACAAACACTAACAGTAACACAAGTAGTCTTCAATTGCCATTTGGGAAGGATAAGATCCCAGAGCTTCAAATGCCTATGATGATCACTGATTGGACCCAAGACACATTTTGGGCTCAATTGAATAGTCCTTGGCTCCAAAACTATACCTACTCCAACATATTAAACTTCTAG | 948 | 0.4367 | MIDMGSSSVIEGEVTLPGFRFHPTEEELLDFYLKNMVVGKKLRFDVIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDRKHGTGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGSKTDWVMNEYRLPDNCPLPKDIVLCKIYRKATSLKVLEQRAAIEEEMKQMVGSPESTPSSTDTMSYEEQQQNQNQNQNLQLLPPQHVVTKKEVEAELEEEKMVHVTLATTKQENKDTTKNNKSSCCGNTNTNSNTSSLQLPFGKDKIPELQMPMMITDWTQDTFWAQLNSPWLQNYTYSNILNF | 315 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu03g00781 | 315 | MobiDBLite | consensus disorder prediction | 183 | 209 | - | - | |
Adu03g00781 | 315 | Pfam | No apical meristem (NAM) protein | 17 | 143 | IPR003441 | GO:0003677|GO:0006355 | |
Adu03g00781 | 315 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 82-RELATED | 13 | 315 | - | - | |
Adu03g00781 | 315 | PANTHER | NAC TRANSCRIPTION FACTOR 29-LIKE | 13 | 315 | - | - | |
Adu03g00781 | 315 | MobiDBLite | consensus disorder prediction | 178 | 209 | - | - | |
Adu03g00781 | 315 | MobiDBLite | consensus disorder prediction | 242 | 272 | - | - | |
Adu03g00781 | 315 | ProSiteProfiles | NAC domain profile. | 15 | 161 | IPR003441 | GO:0003677|GO:0006355 | |
Adu03g00781 | 315 | Gene3D | NAC domain | 24 | 165 | IPR036093 | GO:0003677|GO:0006355 | |
Adu03g00781 | 315 | SUPERFAMILY | NAC domain | 10 | 161 | IPR036093 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu03g00781 | Adu-Chr3 | 7417469 | 7419766 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu03g00781 | 13 | 308 | NAC Transcription Factor Family | AT2G17040 | 58.108 | 4.96e-117 | 337 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Adu03g00781 | NAM | 1.5e-34 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu03g00781 | - | - | adu:107477264 | 586.645 |