Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00780 ATGGCTTTCTTTGTTTGCTTCTCTCTGTTGTTGCTTCTTCTTTCATCATCTGCCACCGCTTGTGATCGTTGTGTCCACCAATCCAAGGCCTCTTTTTTCTCCAAAGCCTCTGCTCTGTCATCTGGGGCGTGTGGTTATGGTGAATTGGCACTGTCGTTAAGTGCTGGAAACCTTGCAGCTGCTGTTCCTTCCATCTTCAGAGATGGTGCTGCTTGTGGTGCGTGTTTCCAGATTAGATGCAAGGCCCCAAAGCTCTGCACAAAATCAGGAACCAGAGTGGTTCTTACTGATCTTAACAAAGATAACAAAACTGATTTTGTTCTTAGCACCAGAGCCTTTCAATCTTTGGCTCTCAAAGGAAAAGCTCAGCATCTTCTCAACCTTGGCATTCTTGACATTGAATACAAAAGGTATCAAAATAATTTTAATCATTTAATTTGTTGTTATTCTTCACAGATATTATATTAA 468 0.4124 MAFFVCFSLLLLLLSSSATACDRCVHQSKASFFSKASALSSGACGYGELALSLSAGNLAAAVPSIFRDGAACGACFQIRCKAPKLCTKSGTRVVLTDLNKDNKTDFVLSTRAFQSLALKGKAQHLLNLGILDIEYKRYQNNFNHLICCYSSQILY 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00780 155 Pfam Lytic transglycolase 60 135 IPR009009 -
Adu03g00780 155 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 41 137 IPR007112 -
Adu03g00780 155 PRINTS Expansin/Lol pI family signature 62 80 IPR007118 GO:0005576
Adu03g00780 155 PRINTS Expansin/Lol pI family signature 128 144 IPR007118 GO:0005576
Adu03g00780 155 PRINTS Expansin/Lol pI family signature 40 58 IPR007118 GO:0005576
Adu03g00780 155 PANTHER EXPANSIN-LIKE A1-RELATED 6 141 - -
Adu03g00780 155 Gene3D - 13 139 IPR036908 -
Adu03g00780 155 SUPERFAMILY Barwin-like endoglucanases 10 139 IPR036908 -
Adu03g00780 155 PANTHER EXPANSIN-B3 6 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00780 Adu-Chr3 7402671 7404432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00780 1 142 Expansin Gene Family AT3G45960 56.944 1.13e-42 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00780 - - adu:107477263 253.447