Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00752 ATGGATGGTACAGCTGCAAGAAAGTCTCAAAAGGCTGACCGAGAAAAAATAAGGAGGGATCGACTCAATGAACAATTTGTAGAACTTGGCAGCATTTTGGACCCTGATAGGCCTAAAAATGACAAAGCAACCATTCTTGGTGATACAATTCAATTGCTGAAGGATCTTACTTCTCAAGTTGGTAAACTCAAAGATGAATATGCTGCACTAAATGAAGAATCTCGTGAATTGGCTCAAGAGAAAAACGATCTCAGGGAAGAGAAGGCTTCTCTTAAAACAGATATTGAAAACTTGAATAATCAGTATCAGCAGCGACTGAGGAACATGTTTCCTTGGACTGCAATGGATCATTCAGTTATGATGGCTCCACCATCATACCCATACCCAATGCCAATGGCTGTCCCTCCGGGTTCAATTCCCTTGCAACCATACCCATTCTTTGCTAATCAAAATCCGTCTGTCATCCCTAACCCCTGTTCAACATTTGTTCCTTATTTAGCACCAAATACCCTTGTTGAACAACAATCTGCCCAGTATGTATCTCCACCGTCTCATCCAGGTACTCGGTCCCATTTGTCAAGTAAACATGACACCAGAAACAAACCACCCAGGGATAGGGAGAGCAAAGCAGAAAAAAGTGAGGCTTCAAATGATGTCACCACAAACCTTGAGTTGAAGACTCCTGGATCTTCTGCAGATCAGGATTTATGGTCCGGAAAAAGGAAATGCAGCAAGCCATTGAGGTCAGAAGGGAGTTCATTAGGTAGGTGTTCATCGTCACATAGTGTTCAGGACAGCTCATCAAGTAGTGTCGATGGTAGCAGAAAGGCTAACGAATGA 840 0.4286 MDGTAARKSQKADREKIRRDRLNEQFVELGSILDPDRPKNDKATILGDTIQLLKDLTSQVGKLKDEYAALNEESRELAQEKNDLREEKASLKTDIENLNNQYQQRLRNMFPWTAMDHSVMMAPPSYPYPMPMAVPPGSIPLQPYPFFANQNPSVIPNPCSTFVPYLAPNTLVEQQSAQYVSPPSHPGTRSHLSSKHDTRNKPPRDRESKAEKSEASNDVTTNLELKTPGSSADQDLWSGKRKCSKPLRSEGSSLGRCSSSHSVQDSSSSSVDGSRKANE 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00752 279 SMART finulus 12 62 IPR011598 GO:0046983
Adu03g00752 279 PANTHER TRANSCRIPTION FACTOR BHLH121 2 278 - -
Adu03g00752 279 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 75 IPR036638 GO:0046983
Adu03g00752 279 MobiDBLite consensus disorder prediction 190 214 - -
Adu03g00752 279 MobiDBLite consensus disorder prediction 175 279 - -
Adu03g00752 279 Coils Coil 5 25 - -
Adu03g00752 279 Pfam Helix-loop-helix DNA-binding domain 7 56 IPR011598 GO:0046983
Adu03g00752 279 Coils Coil 53 108 - -
Adu03g00752 279 MobiDBLite consensus disorder prediction 215 234 - -
Adu03g00752 279 MobiDBLite consensus disorder prediction 175 189 - -
Adu03g00752 279 MobiDBLite consensus disorder prediction 251 279 - -
Adu03g00752 279 CDD bHLH_AtILR3_like 11 85 - -
Adu03g00752 279 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 56 IPR011598 GO:0046983
Adu03g00752 279 PANTHER TRANSCRIPTION FACTOR BHLH121 2 278 IPR044579 GO:0003700|GO:0055072
Adu03g00752 279 Gene3D - 5 87 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00752 Adu-Chr3 7033267 7034863 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00752 4 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 65.560 2.45e-96 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu03g00752 HLH 2.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00752 - - cam:101491902 407.912