Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00722 ATGAACAACAACTACACATATGAAACGGAAGATGAAGAAGACGAAGACGAAGAATCAGTGGAAGACGAAGAAGACGATGAATCACTGGAAGATGAAGAAGAAGAATCTCTGGAAGACGAAGAAGACGATGAATCACTGGAAGACGACGAAGACGATGAATCACTGGAAGATGAAGAAGAAGAACCTCTCGAAGAGGAAGAAGACGATGAATCTCTGGAAGACGAAGAAGACGATGAATCACTGGAAGATGAAAAAGAAGAATCTCTGGAAGACGAAGAAGACGATGAATCACTGGAAGATGAAGAAGAAGAATCTCTAGAAGAATGCACCACATCACGAAAGAGAAGCCGCTTCACTACTTTGACCAAGTCAAACATCAAGAAGCTCCAAAAAACTAAAATCAATGAGGTATCATCTAATCTTTCGATAACAAAATCCGAGGCGTGCCTTTTGCTAATCCACCATGGTTGGAGCGCCACGAAGGTCGACGAGGCCTGGTTCGACGACAAAGAAAGAGTTCGGAAACTTGTTGGATTGCTCAAACACAACACCGGAGAGATCGTAACAACCCAAACTTGTGAGATATGTTTTGATAATACGGTTTGCTTGGAGAAGAAGTTGAAATCCGCCAAGTGTGGCCACGCATACTGCGTCGATTGTTGGAAGCTCTACATCAATGAGAAGATCAAAGAAGGTCCTCATGAGTGCCTCAAACCCATGAGATGCCCTCATCCATCTTGTGAGGCTTCTTTGGAGATTAACATGATTCGGCGATTCGCTAGCCAGCAAAACAGGAAGATGTACGATCGTTTCTTGTTACGATCTTATGTCGAAACAAGAAAGAATATAAAGTGGTGTCCAAGGCCTGATTGCGATCTTGCTGTTAGGTACAAATCAGATGGAAATTATGTTAACAAATATGTTGAAGTAAGTTGCAGGAATGGGCATAGGTTTTGCTGGGGATGCGGCGAAGATGCTCATAGACCCGTGAGTTGTGAAATGATGGCTAAGAAGAACCAAGAAAGTGGTGATTCTAAGAGCTTGCGTTGGATCTCTACTTTCACCAAGAAATGCCCTAGTTGTAAGCAACCCATTGAGAGGAACGGGGGTTGCATGCACGTAACATGCACTGTTTGCAGCTACCAATTTTGCTGGCTATGTCTTTCTGATTGGTTTCTGTGTTCCGCCCGTTGCAACCGTTTCTAG 1206 0.4353 MNNNYTYETEDEEDEDEESVEDEEDDESLEDEEEESLEDEEDDESLEDDEDDESLEDEEEEPLEEEEDDESLEDEEDDESLEDEKEESLEDEEDDESLEDEEEESLEECTTSRKRSRFTTLTKSNIKKLQKTKINEVSSNLSITKSEACLLLIHHGWSATKVDEAWFDDKERVRKLVGLLKHNTGEIVTTQTCEICFDNTVCLEKKLKSAKCGHAYCVDCWKLYINEKIKEGPHECLKPMRCPHPSCEASLEINMIRRFASQQNRKMYDRFLLRSYVETRKNIKWCPRPDCDLAVRYKSDGNYVNKYVEVSCRNGHRFCWGCGEDAHRPVSCEMMAKKNQESGDSKSLRWISTFTKKCPSCKQPIERNGGCMHVTCTVCSYQFCWLCLSDWFLCSARCNRF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00722 401 MobiDBLite consensus disorder prediction 7 106 - -
Adu03g00722 401 SUPERFAMILY RING/U-box 190 275 - -
Adu03g00722 401 SUPERFAMILY RING/U-box 350 394 - -
Adu03g00722 401 ProSiteProfiles Zinc finger RING-type profile. 193 243 IPR001841 -
Adu03g00722 401 SUPERFAMILY RING/U-box 268 338 - -
Adu03g00722 401 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 87 401 IPR031127 GO:0004842|GO:0016567
Adu03g00722 401 Gene3D - 328 401 - -
Adu03g00722 401 ProSiteProfiles TRIAD supradomain profile. 189 401 IPR044066 -
Adu03g00722 401 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED 87 401 - -
Adu03g00722 401 Pfam IBR domain, a half RING-finger domain 267 332 IPR002867 -
Adu03g00722 401 Pfam IBR domain, a half RING-finger domain 347 391 IPR002867 -
Adu03g00722 401 MobiDBLite consensus disorder prediction 1 113 - -
Adu03g00722 401 Coils Coil 20 49 - -
Adu03g00722 401 SMART ibrneu5 340 394 IPR002867 -
Adu03g00722 401 SMART ibrneu5 266 332 IPR002867 -
Adu03g00722 401 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 188 280 IPR013083 -
Adu03g00722 401 Coils Coil 72 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00722 Adu-Chr3 6721669 6722874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00722 116 391 ARIADNE family AT1G05890 43.463 1.31e-76 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00722 K11968 - gmx:100801350 300.827