Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00701 ATGTACTTGAGGAGAATACAGTGTAGGGACCGGAGATGGGCTTTCGTATTGCAGCCATCAAAATACTCTTTTAGTCCAAGATTCTCAGATCATGCAAACTTGCAATCTTTTTCCTCCAAGACCACTGTGAGAGCATATGCTTCTCATGGTAGTTTCTTGAGAAGACATCTTTTAGGTTCAGATTCATATAGCTCTGCTTCATATAGAAATAATTGTATTGGTCTGGACAAAAGGACTAGTTTATGTATAAGTACTCAGTTACGTGCATATAGTTCTGAAAGTGATGGAAGAAATGCAAGTGAGGATAAACATGTGCACGTTAAAGATGGAGCTAACATTGATAAAGGGAAAAATCAGAAAGAGAAGTTTGACAAAGATGTCAAGTATTGCAATGAGCATGCACGACTTGGCGAGCAGGATCAAGCGGAATGGCTTCATAATGAGAAACTTGGAATAGAAAGTAAGAAGAAAGAATCACCATTTTTGACAAGAAGGGATAAGTTCAGAAATGAGTTTCTAAGAAGAATTGTTCCTTGGGAGAAAATAAACATTTCATGGGACTCATTTCCTTATCATGTCAATGAGCACACCAAGAATCTACTGGTGGAATGTACTGCTTCACATTTGAGACATAATTCATTCGCTTCATCTTTTGGTGTTCGTCTCACATCTTCAAGTGGGAGGATATTGCTTCAGAGTGTTCCTGGCACTGAACTCTATCGTGAGAGGCTAGTTAAAGCTCTTGCACATGATTTACAAGTTCCATTATTAGTTCTTGATAGTAGCATCCTTGCTCCTTATGACATTGATGATGAATTATCATCAGACTATGAGTCTGAAGATGATAATGCAGACTCCGGGGCAGAGGGCTCTTTGGAGTCAGAGAATGAGGATGATAATGATGCTGGCAATGAAGAAGAGTGGACTAGCAGTAATGAAGTGAAGTCGGATGCAAGTGAAAATGAAAATGATAATGATGATGCAATTGCATCGGCTGAGGCTGCTCTTAAGAAGGTTAAAGCAGCTGTTCAGAAACTTGTTCCTTACAACATTGAAGAATTTGAAAAGATATCATCTGGAGAATCTGAGAGTTCTGAGTCATCTAGGTCTAATGAAGCCAATTCTTCTGATAAATCTGGGTGCCAGATAAGAAAAGGTGACCGAGTGAAGTACATTGGACCATCTACTCGAGCTACAATTGATGATAGGCCTTTAACCACTGGTCAGAGAGGAGAGGTATATGAAGTAAGCGGAGATCAAGTTGCTGTCATAATGGATATTAATGAAGATCGTGGCAATGAGGGTGGGGCAGAGAATCTTAGTAGTGACCATCATACAAAACCACCGATTCGTTGGCTACATGTTAAGGACATTGAGAATGATCTTGATGCTCAAGCACTAGATTGCTATATAGCACTGGAGGCTTTATGTGAGGTTTTGCATTCGAAACAACCGCTCATTGTCTACTTTCCAGATGGTTCACAGTGGTTGCATAAATCAGTTCCTAAGTCAAACCGTAATGAGTTTTTTCACAAGGTTGAAGAGCTGTTTGATCGGTTATCTGGCCCCGTTGTGTTGATCTGTGGGCAAAACAAAGTTCAATCAGGATCAAAGGAGAAAGAACAATTTACAATGATACTTCCAAACTTTGGACGAGTTGCTAAGCTGCCTCTTTCTCTGAAGCGTTTGACTGAGGGATTCAGAGGTGCAAAGAGATCAGAAGATGATGAAATTCACAAGCTTTTTTCTAATGTTTTGTGCGTACACCCACCTAAGGATGAAAATGTGCTGGTAACATTTAAGAAACAACTTGAAGAAGACAGGAAAATTGTCGTTTCAAGAAGTAATTTGAATGAATTAAGGAAGGTTCTCGAAGAACATCAGCTGTCATGTGTGGATCTATTGCATGTAAACACTGATGGTGTTATTTTGACAAAGCAAAAAGCTGAAAAAGTTATTGGGTGGTCGAAAAACCATTACTTATCATCATGTCTGCTCCCTTCTGTGAAAGGAGAACGGTTGTGCATCCCTCGTGAAAGTCTTGAGATTGCAATCTCAAGGTTGAAGGGCCAGGAAAATATATCACAGAAGCCTTCCCAAAACCTTAAGAACCTTGCGAAGGATGAGTTTGAGAGCAATTTCATTTCAGCTGTGGTACCCCCTGGTGAAATTGGGGTGAAGTTTGATGATATAGGTGCTCTTGAAAACGTGAAGAAGGCACTTAATGAACTTGTTATTCTTCCGATGAGAAGACCAGAACTCTTCTCTCGTGGTAACTTGTTGCGGCCTTGCAAAGGAATATTACTTTTTGGTCCTCCTGGAACTGGAAAAACACTTCTGGCCAAAGCACTTGCAACTGAAGCTGGTGCAAATTTTATTAGCATAACTGGTTCAACTCTTACTTCAAAGTGGTTTGGAGATGCAGAAAAACTAACAAAAGCTCTTTTCTCCTTTGCTAGCAAGCTTTCTCCTGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTGGTGCTCGTGGTGGTGCTTTTGAGCATGAAGCCACTAGGAGGATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGATCAAAAGAAAATCAAAGAATCCTCATTCTTGGTGCAACAAACCGGCCATTTGACCTTGACGATGCTGTCATTCGTCGCTTACCAAGAAGGATATATGTTGATTTACCTGATGCCGAAAATCGAATGAAGATTTTGAGAATATTTCTTGCACAAGAGAATTTGGATCCTAATTTTGAGTATGACAAACTTGCTAACTTGACTGAAGGATACTCTGGCAGTGATTTGAAGAACCTTTGTGTTGCTGCGGCATACAGACCTGTTCAAGAGCTCATAGAGGAAGAAAACATTGCACAGGGAGGGACTAATAGTACAACTACAGTATTAAGGCCTCTTAATTTGGATGATTTTATTCAGTCAAAATCCAAGGTGGGTCCATCGGTGGCATACGATGCAACAAGTATGAATGAGCTGAGGAAGTGGAATGAAATGTATGGTGAAGGTGGTAGTAGGACCAAAGCATCATTCGGATTTTGA 3063 0.4019 MYLRRIQCRDRRWAFVLQPSKYSFSPRFSDHANLQSFSSKTTVRAYASHGSFLRRHLLGSDSYSSASYRNNCIGLDKRTSLCISTQLRAYSSESDGRNASEDKHVHVKDGANIDKGKNQKEKFDKDVKYCNEHARLGEQDQAEWLHNEKLGIESKKKESPFLTRRDKFRNEFLRRIVPWEKINISWDSFPYHVNEHTKNLLVECTASHLRHNSFASSFGVRLTSSSGRILLQSVPGTELYRERLVKALAHDLQVPLLVLDSSILAPYDIDDELSSDYESEDDNADSGAEGSLESENEDDNDAGNEEEWTSSNEVKSDASENENDNDDAIASAEAALKKVKAAVQKLVPYNIEEFEKISSGESESSESSRSNEANSSDKSGCQIRKGDRVKYIGPSTRATIDDRPLTTGQRGEVYEVSGDQVAVIMDINEDRGNEGGAENLSSDHHTKPPIRWLHVKDIENDLDAQALDCYIALEALCEVLHSKQPLIVYFPDGSQWLHKSVPKSNRNEFFHKVEELFDRLSGPVVLICGQNKVQSGSKEKEQFTMILPNFGRVAKLPLSLKRLTEGFRGAKRSEDDEIHKLFSNVLCVHPPKDENVLVTFKKQLEEDRKIVVSRSNLNELRKVLEEHQLSCVDLLHVNTDGVILTKQKAEKVIGWSKNHYLSSCLLPSVKGERLCIPRESLEIAISRLKGQENISQKPSQNLKNLAKDEFESNFISAVVPPGEIGVKFDDIGALENVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLSPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQENLDPNFEYDKLANLTEGYSGSDLKNLCVAAAYRPVQELIEEENIAQGGTNSTTTVLRPLNLDDFIQSKSKVGPSVAYDATSMNELRKWNEMYGEGGSRTKASFGF 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00701 1020 MobiDBLite consensus disorder prediction 363 380 - -
Adu03g00701 1020 MobiDBLite consensus disorder prediction 273 306 - -
Adu03g00701 1020 Pfam AAA+ lid domain 921 956 IPR041569 -
Adu03g00701 1020 Pfam ATPase family associated with various cellular activities (AAA) 767 897 IPR003959 GO:0005524|GO:0016887
Adu03g00701 1020 ProSitePatterns AAA-protein family signature. 870 889 IPR003960 GO:0005524|GO:0016887
Adu03g00701 1020 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 400 1020 - -
Adu03g00701 1020 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 397 - -
Adu03g00701 1020 SMART AAA_5 763 900 IPR003593 -
Adu03g00701 1020 CDD AAA 765 898 - -
Adu03g00701 1020 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 397 - -
Adu03g00701 1020 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 400 1020 - -
Adu03g00701 1020 Gene3D - 899 984 - -
Adu03g00701 1020 MobiDBLite consensus disorder prediction 308 322 - -
Adu03g00701 1020 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 725 947 IPR027417 -
Adu03g00701 1020 MobiDBLite consensus disorder prediction 273 324 - -
Adu03g00701 1020 MobiDBLite consensus disorder prediction 357 386 - -
Adu03g00701 1020 Gene3D - 725 993 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00701 Adu-Chr3 6509107 6519734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00701 726 976 Calmodulin-binding Proteins AT3G56690 35.433 5.93e-40 158