Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00673 ATGGCTTCGGCGTTCGTCAAGCTCGATGATTCTCCAATGTTCCAGAAGCAGGTATTGTCTCTTGAAGCAAATGCTGATGAGTTAAAGGATCGGTGCCAGAAGTTGTTCAAAGGATGTAAGAAGTTTATGACAGCTTTGGGGGAAGCATATAATGGAGAAATTGGCTTTGCTGATTCATTAGAAATATTTGGCGGTGGCCTGGATGACCCTGTTAGTGTGTCAATTGGAGGACCGGTCATATCTAGATTTGTTACTACATTACGTGAGCTAGCTACTTTTAAAGAGCTTCTTCGTTCGCAGGTTGAACATGTGATGATTGACCGGCTCGCGGAGTTTATGAATGTTGATTTGCAAGAGGCAAAGGATTCTCGGAAACGTTTTGACAAAGCTATGCATTCTTACGATCAGTCACGAGAAAAATTTGTATCTTTGAAGAAAAATACGCCGGAAGACGTTGTTGCTGAATTAGAAGAGGATCTACAAAATTCGAAGTCAGCATTTGAAAAAAGTCGCTTCAATCTAGTACACTCTCTCATGAATATCGAAGTGAAAAAGAAGTATGAGTTCTTGGAGTCCATTAGTGCGATAATGGATGCTCATCTAAGATACTTTAAGCTGGGCTATGAGTTATTGAGCCAAATGGAACCGTATATTCACCAGGTGTTAACATGTGCACAACAATCTAAAGAACTGGCTAATATTGAACAAGATAAGCTTGCAAAACGAATCCAAGAATATAGAACACAGGCCGAGTTGGAAAGCACACGAGCTTCTAACAACACGGAACCCTTGCCAGGTGCTGATGGCACACATGTTGTAGGTTTGAACACTTACAAAGGCTTTGAAGGAGGGATGCAGCCTGCGGCCAAAGGGGAGGCAATTAAACAGGGCTATCTATTAAAACGCTCTTCAAGCTCACGAGGAGATTGGAAACGGAGGTTCTTTGTACTTGATAACCAGGGGAGTTTATTTTATTACAGCATGAAGGGACCCAAACCCAAGGGTGCTCAGTCATATAATTATAATCGTCCTCCTGAACAAAATAGTGGCATGTTTGGTAGATTTCGATCAAGGCACAACAGGTCATCATCACAAAATGAGGATGCTTTGGGTTGTTGTTCAATTGATCTGTGCACATCCTCTATAAAGATGGATGCAGAGGATACAGATCTACGTCTTTGCTTCCGTATAATTTCTCCCTCAAAAACATATACACTGCAGGCAGAAAATGAAGCTGATAGGATGGACTGGGTAAACAAAATTACTGGGGCTGTCACGTCGCTCTTTAATTCTCACTTTCTTCAACAGCCTCGTTATGATAGAGAAAATAGAAACTCAGCAACTGGTGCTTCGTCAACTAGTCAATCAGAGGATGGTGACAAATATTTGATGGATGACATATATCCAAAGGAAGTCCATAGTGTCTCTAAGATTTTAAGGGGAATTCCTGGGAATGATAAATGTGCTGAATGCAGTGCTGCTGATCCGGACTGGGCATCTTTAAACCTTGGCATATTACTCTGTATAGAATGCTCTGGAGTGCATCGAAATCTTGGAGTTCATATCTCGAAGGTGAGATCTATAACATTAGATGTTAAGGTATGGGAGCCTACTATTTTGGATTTATTTGATAAGTTGGGTAATGCTTATTGTAATTCGATATGGGAAGGCATGCTTCTACTTGGTAATGAAAGAGTAGGTGAATCAAATGGGCCAGCAAAACCATGTTTCATGGATGCCTTCCAAGATAAGGAAAAGTACATACAGGCAAAGTATGTACAGAAATCATTAATTATCAGAGAAGAGGATGTTCCCGGGAATCCTTCAGTTTCTGTAAGAATCTGGCTAGCGGTTCAAGCTATGAATGTACGAGAAGTATATCGCCTTATTGTAATCTCAAACTCAAATGTAGTAAATACGAAATATGATGATGTGGTTTCCCATGCTGATGCTAAAGCCCTGGACTTAGAATGTATTATATTGGAAGGCCATGAGCAGGATTCTGAATCTTGCCTCAGCATTAAACAGACTAATGAGACACAGAAGTGTTTCCATGGTTGGTCATTATTACATCTAGCATGTCATTCTGAACATGCACTAATGGTTGAGTTGTTACTTCAATTTGCTGCTGATGTAAACATGCAAGACTATCATGGTAGAACACCCTTGCACCATTGCATCACCGGTGGAAAAAATTCACTGGCGAAGTTTCTGTTGAGAAGGGGTGCTAGACCGTCAGTTAAAGATGCCGGCGGACTCACTATGGAAACGGTGGCAGCTAAGACTTTGATATGGTGTGGAATTCGGAGACTAACAGCTCCTTCCTTTTACGAAACCGAACCTCTGCTGATTGCATTTTGA 2361 0.4113 MASAFVKLDDSPMFQKQVLSLEANADELKDRCQKLFKGCKKFMTALGEAYNGEIGFADSLEIFGGGLDDPVSVSIGGPVISRFVTTLRELATFKELLRSQVEHVMIDRLAEFMNVDLQEAKDSRKRFDKAMHSYDQSREKFVSLKKNTPEDVVAELEEDLQNSKSAFEKSRFNLVHSLMNIEVKKKYEFLESISAIMDAHLRYFKLGYELLSQMEPYIHQVLTCAQQSKELANIEQDKLAKRIQEYRTQAELESTRASNNTEPLPGADGTHVVGLNTYKGFEGGMQPAAKGEAIKQGYLLKRSSSSRGDWKRRFFVLDNQGSLFYYSMKGPKPKGAQSYNYNRPPEQNSGMFGRFRSRHNRSSSQNEDALGCCSIDLCTSSIKMDAEDTDLRLCFRIISPSKTYTLQAENEADRMDWVNKITGAVTSLFNSHFLQQPRYDRENRNSATGASSTSQSEDGDKYLMDDIYPKEVHSVSKILRGIPGNDKCAECSAADPDWASLNLGILLCIECSGVHRNLGVHISKVRSITLDVKVWEPTILDLFDKLGNAYCNSIWEGMLLLGNERVGESNGPAKPCFMDAFQDKEKYIQAKYVQKSLIIREEDVPGNPSVSVRIWLAVQAMNVREVYRLIVISNSNVVNTKYDDVVSHADAKALDLECIILEGHEQDSESCLSIKQTNETQKCFHGWSLLHLACHSEHALMVELLLQFAADVNMQDYHGRTPLHHCITGGKNSLAKFLLRRGARPSVKDAGGLTMETVAAKTLIWCGIRRLTAPSFYETEPLLIAF 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00673 786 SUPERFAMILY ArfGap/RecO-like zinc finger 475 598 IPR037278 -
Adu03g00673 786 Pfam BAR domain of APPL family 8 230 - -
Adu03g00673 786 PANTHER CENTAURIN/ARF 3 755 IPR045258 GO:0005096
Adu03g00673 786 MobiDBLite consensus disorder prediction 250 269 - -
Adu03g00673 786 PRINTS HIV Rev interacting protein signature 527 548 IPR001164 GO:0005096
Adu03g00673 786 PRINTS HIV Rev interacting protein signature 485 504 IPR001164 GO:0005096
Adu03g00673 786 PRINTS HIV Rev interacting protein signature 504 521 IPR001164 GO:0005096
Adu03g00673 786 MobiDBLite consensus disorder prediction 440 458 - -
Adu03g00673 786 Pfam Ankyrin repeats (3 copies) 678 749 IPR002110 GO:0005515
Adu03g00673 786 SMART PH_update 293 428 IPR001849 -
Adu03g00673 786 SUPERFAMILY Ankyrin repeat 663 761 IPR036770 -
Adu03g00673 786 Gene3D Arfaptin homology (AH) domain/BAR domain 7 252 IPR027267 -
Adu03g00673 786 SMART ANK_2a 718 747 IPR002110 GO:0005515
Adu03g00673 786 SMART ANK_2a 685 714 IPR002110 GO:0005515
Adu03g00673 786 ProSiteProfiles Ankyrin repeat profile. 718 750 IPR002110 GO:0005515
Adu03g00673 786 MobiDBLite consensus disorder prediction 250 265 - -
Adu03g00673 786 Gene3D Arf GTPase activating protein 463 605 IPR038508 -
Adu03g00673 786 ProSiteProfiles Ankyrin repeat profile. 685 717 IPR002110 GO:0005515
Adu03g00673 786 Gene3D - 633 770 IPR036770 -
Adu03g00673 786 ProSiteProfiles PH domain profile. 292 426 IPR001849 -
Adu03g00673 786 SUPERFAMILY BAR/IMD domain-like 8 315 IPR027267 -
Adu03g00673 786 SMART arf_gap_3 473 605 IPR001164 GO:0005096
Adu03g00673 786 SUPERFAMILY PH domain-like 288 425 - -
Adu03g00673 786 Gene3D - 287 438 IPR011993 -
Adu03g00673 786 ProSiteProfiles ARF GTPase-activating proteins domain profile. 473 605 IPR001164 GO:0005096
Adu03g00673 786 CDD BAR_SFC_plant 16 217 IPR035670 -
Adu03g00673 786 Pfam Putative GTPase activating protein for Arf 476 597 IPR001164 GO:0005096
Adu03g00673 786 CDD ArfGap 477 592 - -
Adu03g00673 786 CDD PH_ACAP 295 430 - -
Adu03g00673 786 MobiDBLite consensus disorder prediction 440 461 - -
Adu03g00673 786 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD2 3 755 - -
Adu03g00673 786 Pfam PH domain 294 424 IPR001849 -
Adu03g00673 786 SMART 5bar 13 220 IPR004148 GO:0005515|GO:0005737
Adu03g00673 786 Coils Coil 229 249 - -
Adu03g00673 786 ProSiteProfiles Ankyrin repeat region circular profile. 685 716 - -
Adu03g00673 786 ProSiteProfiles Ankyrin repeat region circular profile. 718 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00673 Adu-Chr3 6283030 6292240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00673 485 592 C2H2 Transcription Factor Family AT4G21160 41.818 1.81e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00673 K12489 - gmx:100796740 1237.63