Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00652 ATGGGGGTTTCGGAAAACTCGACGGGTTTGGCTTTGGCGTTGGGTTCCAGTGCATTCATTGGTGCTAGCTTCATCCTCAAGAAGAAGGGTCTCAAGCGTGCTGCTGCCACCGGCACTCGTGCAGGTGTTGGTGGTTATACTTATTTACTAGAGCCACTTTGGTGGGCTGGCATGGTTTCAATGATTGTTGGGGAGGTAGCAAACTTTGTGGCTTATATTTATGCTCCGGCAATACTCGTTACGCCGCTTGGCGCGATCAGTATTATTGTCAGTGCTGTTTTGGCTCACTTCTTGCTGAATGAGCGGCTTCAGACGATGGGGGTATTAGGATGTCTGTCCTGCATTGTGGGATCAATTGTCATTGTCATCCATGCTCCTCAAGAGCAAACTCCGACTTCTGTCCAAGAAATATGGGATTTGGCCACTCAACCAGCATTTCTATTTTATGCCGTGGCAACAATTTCTTTAGTTTTGGCTTTGATTTTACACTTCGAGCCTCGCTATGGACAGTCTAATATGCTGGTTTACTTGGGAATTTGTTCATTAATGGGCTCATTTACGGTTGTGAGCATCAAGGCCATTGGTATTGCAATAAAGCTAACACTTGATGGAATTAACCAAATAGCTTATCCTCAGACTTGGTTTTTTCTCACAGTTTCAGCAATATGTGTTATCACACAGCTGAATTACCTTAACAGGGCACTGGATACATTCAATGCAGCTATTGTTTCCCCTGTATATTATGTTATGTTCACAACTCTCACCATTATTGCCAGTGCAATAATGTTTAAGGATTGGTCTGGTCAGGATGCTACCAGCATAGCGTCTGAGATATGTGGCTTCATCACCATTCTTTCAGGAACAATGATATTGCATATTACCAGAAAACAGGAAGAGTCCGATATGCAAAGGACCTTAAAATTCTACGTTGGCGAGGATTCAATGAAGGGCCTTGAGGATGAACACCTGATCCTTATACATGCGAGCATTGCATTCATGTCTTTGATCTTGGAGCTTGAATTCAAGCATCCCGGAGTGCTAAAGTTTTCTGACCGTTTCTCCACCCTCCTTGGAGTGATCTCAAAATGTCTGATGCGGTGCAGTTCAACGGCCGAAATGGGGATTGCTAACTCCAACAATAACGAAACTGCCCTCACCGGAAAACCACTAGCCGACTTCCCATCTTTGGCCGCGGCGGCCGCCGCAAAACCCAAGAAGAAGAAAGGCCAGACCTTTTCCCTTGCTGAGTTCACTGCCGCCAAAACCGACTACCAAGATCCCATCGTGCTCCCCACCGGTCCGCGCCAGCGCACCGCCGAGGAGCTCGACCGCGACCGCAACCGTCTTGGCGGAGGCTTCAGGAACTACGGCGGTGACCGCGCCAACAGAAGCTCCGGTGGTGGTGATGATTCCTCCAATTCGAGGTGGGGTTCCTCTAGGGTTTCTGACGAGCCGAGGCGGAACGGTGGGTTTAGGGATTCGAATCGCGAATTGGCTCCTTCCCGCGCCGACGAGATTGATAATTGGGCCGCCGCGAAGAAATCAACGGTCGGTAACGGTTTCGAGAGGAGGGAAAGGGATAGAGATAGGGAAAGGAGCGGTTTTTTCGATTCCCAATCGCGTGCTGATGAATCCGATAGTTGGGTTACGAACAAGAGTTCTGTGCCGTCAGAGAGTCGGAGATTCGGTTCCAACGGCGGTTCTGGTGGTCTTGGGTTTGAAAGAGAGAGGAAGGTAGGGTTTGGGTCTAGCGGCGGCGCAGATTCTGATAATTGGAACAAGAAAAAGGTTGAATTTAACGGTGGAAGTGAGAGGAGTGAGGGTGGTGGTGGGAGACCTAGGCTTGTTCTGCAACCTCGTACATCGCCTGTGAACAATGAGAGCCAGGAGGGTGCTGGTAATGGTAATGGTAATGTGGTGAAACCAAAGGGTCCGAGCCCATTCGGCGAGGCGAGACCGAGGGAGGAGGTGCTGGCGGAGAAGGGGCAGGATTGGAAGAAGATTGATGAGCAGCTTGAGAGCATGAAGATTAAGGAGGCTGCTGAGAAAAAAGAGAGTTTTGGAAAGAGGGGTTTTGGTTCTGCCAATGGACGTGGTTCTAGTTTGTCTGAAGCCAGGGCTGAGCGGAGTTGGAGGAAGCCGGAATCCGAGACCGAGAGGAAGGCAGAATCTGAGACCGAGAGCAAGCCGGAATCTGATGATGGTCGTCCGAAAAGTGCTGATTCTGAGAAAATGGAGGATGAACATGTTGAAGAAAACTGA 2262 0.4934 MGVSENSTGLALALGSSAFIGASFILKKKGLKRAAATGTRAGVGGYTYLLEPLWWAGMVSMIVGEVANFVAYIYAPAILVTPLGAISIIVSAVLAHFLLNERLQTMGVLGCLSCIVGSIVIVIHAPQEQTPTSVQEIWDLATQPAFLFYAVATISLVLALILHFEPRYGQSNMLVYLGICSLMGSFTVVSIKAIGIAIKLTLDGINQIAYPQTWFFLTVSAICVITQLNYLNRALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDATSIASEICGFITILSGTMILHITRKQEESDMQRTLKFYVGEDSMKGLEDEHLILIHASIAFMSLILELEFKHPGVLKFSDRFSTLLGVISKCLMRCSSTAEMGIANSNNNETALTGKPLADFPSLAAAAAAKPKKKKGQTFSLAEFTAAKTDYQDPIVLPTGPRQRTAEELDRDRNRLGGGFRNYGGDRANRSSGGGDDSSNSRWGSSRVSDEPRRNGGFRDSNRELAPSRADEIDNWAAAKKSTVGNGFERRERDRDRERSGFFDSQSRADESDSWVTNKSSVPSESRRFGSNGGSGGLGFERERKVGFGSSGGADSDNWNKKKVEFNGGSERSEGGGGRPRLVLQPRTSPVNNESQEGAGNGNGNVVKPKGPSPFGEARPREEVLAEKGQDWKKIDEQLESMKIKEAAEKKESFGKRGFGSANGRGSSLSEARAERSWRKPESETERKAESETESKPESDDGRPKSADSEKMEDEHVEEN 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00652 753 MobiDBLite consensus disorder prediction 619 635 - -
Adu03g00652 753 Pfam Plant specific eukaryotic initiation factor 4B 380 678 IPR010433 GO:0003743
Adu03g00652 753 MobiDBLite consensus disorder prediction 648 689 - -
Adu03g00652 753 MobiDBLite consensus disorder prediction 518 539 - -
Adu03g00652 753 MobiDBLite consensus disorder prediction 426 753 - -
Adu03g00652 753 PANTHER MAGNESIUM TRANSPORTER NIPA6-RELATED 2 329 - -
Adu03g00652 753 MobiDBLite consensus disorder prediction 465 479 - -
Adu03g00652 753 MobiDBLite consensus disorder prediction 705 753 - -
Adu03g00652 753 Pfam Magnesium transporter NIPA 6 296 IPR008521 GO:0015095|GO:0015693|GO:0016021
Adu03g00652 753 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 124 - -
Adu03g00652 753 PANTHER UNCHARACTERIZED 2 329 IPR008521 GO:0015095|GO:0015693|GO:0016021
Adu03g00652 753 MobiDBLite consensus disorder prediction 540 564 - -
Adu03g00652 753 MobiDBLite consensus disorder prediction 480 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00652 Adu-Chr3 6009899 6015905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00652 391 713 Eukaryotic Initiation Factors Gene Family AT4G38710 51.515 2.88e-64 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00652 K22733 - gmx:100817349 561.607