Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00645 ATGGATTGCATGAGAATCCAAAGCACCTTGTCTCATacaaagaactggaaatatgatgtgtttgtgagtttcagaggcgagactcgcttcaacttcaccgctcatctttatgctgctctctgcagacacggcatagttgccttcagggatgatactaggctcgagaaaggaggacctatatcagcaggccttctgcaagctattgaaggatcacaggttctgattgttgtcttctctattaactatgcttcttccacatggtgcttgcaagaactggcaaagatagctgattgcattaacataccggaacaccgtgttctgcctgttttctgtgatgtgagtccatctgaggtgagaaagcaaagtggaaattacgaaaaagcctttgtggaatacgaagaaagattcaaagaagatgaagagatgatggagcaagtgcgaagatggagggcagctctaacacaagtagccagtctctctggctgggatctcaaggataaGTCACATTCTGCTGAAATTGAAAAAATTGTCAAAACAGTGACCAAGATATTGAGTCCCAGACCATCATCGAGTCTATCTAATGATATAGTAGTTGGGATGGAGTTCTCTCTACAAGAACTAGGGAAGCTTCTAGTTTTGGACTCAGATGATGATGTTCGAGTTGTAGGGATTTGTGGAATGGGTGGTATAGGAAAAACAACTCTTGCTTGCAGATTATATGAAAAAATCTCTCATCAATATGATGTTTCATGCTTTATGGATGATGTAAGTAAAACATATAGAGATTGTGGTTCACTTGGTATGAAAAAGCAGCTTCTTTGTCCAGCTTTCATGGAAGAAGATTCTCTAATATGCAACATTTCAATGGCAGATAATTTGATTCAAAATATGTTACACTATAGAAAGGTTCTCATAGTTTTGGATAATGTTGATCAGAGAATTCAGTTGGAGAAGTTGGCTTTAAAAAGGGAACGGTTAGGTAGAGGGAGTAGAATAATCATAGTTTCTAGAGATGAGCATATATTGAGAGAGTATGAAGTGGATGATGTTTACAAAGTTCAACTCTTAAATGATGAGAATGCTAACCAATTGTTTTGCAGAAAAGCTTTCAAACGTAATCATGTTGCAAAAGATTATGAAAGCCTGACAGATTCTGCATTAGCATATGCTAATGGACTTCCTTTAGCAATTAAAGTATTGGGCTCATTTTTGTTTGGGCGAGATGTCTCTGAATGGAGTAGTGCATTGGTTAGACTGAAAGAAACTCCAACAAAAGATATTATGGATGTGCTTCGAATCAGTTTTGATGGACTTGAGGATGACGAAAAAGACATATTTCTTGATATTGCCTGTTTTTTTCCCAATGACATTGAAAACTATGTAAAAGATATTTTACGTATTCGAGGATTCCATCCTGATATTGGTATAAAAGTTCTCATTGAAAAATCACTCATAACCCGGGATCGGTGGAAGATCACTATGCACGATTTGTTGAGAGACTTGGGAAGAAGTATTGTTCGAGAAAAATCACCCAAAAAACCGAGAAAGTGGAGCAGGTTATGGAATCACAAGGATCTAAGCAATGTCTTGCGAGAAAACAAGCCAGCAGAGAATGTTGAAGCCATAGTTTTGCCAACAAATGATGAAATAAGAGAAGAGTTGTCATTAGAAGCTTTATCAAAAATGAGTCGCCTAAAGTTACTCAAACTTGGCCAAGTGAAAGTGAATTTCCCAGGCAGGCTGCATTTTCTTTCTAATGAGTTGGGATATCTTTCTTGGAAAGAATATCCTTTCACATGTTTGCCATCAAGCTTTCAACCAACTCAACTCGTTAAATTAATCCTACGTCATAGTAACGTCAAAGAACTCTGGGAGGGAATAAAGGATCTACATAAATTGACACATTTAGAGCTATGTTATTCCAAAAGTCTCGTAAAGATACCAAATTTATCTCAGGCCCCAAATCTTTCGCACATAAATCTTAAAGGATGTGTGAAACTTGTTCACCTTGATACATCCATTGGTGCTCTAGAAAAGCTTAGTTTCTTGAATCTGGAAAACTGCAAAAGTCTTGTTAGTATTCCCAGCAATGTATTTGGTCTTAGATCTCTTTGTGATTTAAATTTATCTGGCTGTTCGAAATTAATTGGATATCGGTTGTTAGAGAACAAGCAAAGTGTGGCATCCTCTATATGCAAAGCTCTTACAAGGCCTCTCAATTTTCGGTCTTCTAGAAGGCGTGCCAATTCAGTTGGTTTGTTGGTGTCTTCTTTGTCTCATTTCCCTTTGGTAACTCTTGACATAAGTTTTTGTAATCTAGTTGAAATCCCTGATGTTATTGGACAGTTACATTGTTTAGAAGATTTAAACATAGGGGGAAACAATATTGTTATGCTACCTCATTCCATCAATGAACTTCCCAAGCTAAGGCAGTTGAACTTGCAGTACTGTAAGCAACTAAAGTGGTTGCCTAGGAACCTTTTGCCGTTAGGAGGTACCAGTGGAAGAGTTCACTATGGAGGAATATATGGAGCAATATGTGTTTTCAACTGCCCTAATTTGAGTGACAACGTAGGTTGTTGTCTCGCAGTTATTTCATGGATGATAAAAATGATTCAGGTGAACATGCAATCCTCTTCACCTAGATGCGTCATTCAAGTTGTTATTCCAGGAACTCAAATTCCAAGGTGGTTCAACAATCAGAAAGAGGGTAGTTCAATGAAGCTGGATCCATCTCCCATTCTGAATGACAATAATCGGATTATTGGCATTGCTTGTTGTGTGACATTTGTTGTACATGATACTCCAACTCAATTGCCTGAAGAACCCAAACATGCTGGTGATATTGGATGCGGTTTTCGTCTTCGCTCTGGGGGAACTTATTTTGCGGTTCCAATACGTCTTAAGAAAGATTTTATCACAACTGAATTAGATCATATGTTGCTAATATTTTTCTCCCGGGACAAGATCATTGATCATTATACAAGTCATTTAAAAGAGGGAAGATGTGATCTTGATGGTATTGAATTGGCCACCAGGAGTGAATATCCAGAAGAAATAATACAAGTGAAGAGTTGTGGTTACCGTTGGGTATGTAAGGAAGATCTGGAACAATTAAACCCAACAATGATGCATAGCGCCGATTCTTCAACTCAGAATAAGAAGCGCAAGTTTTTGGCAATTCAATGA 3189 0.3186 MDCMRIQSTLSHTKNWKYDVFVSFRGETRFNFTAHLYAALCRHGIVAFRDDTRLEKGGPISAGLLQAIEGSQVLIVVFSINYASSTWCLQELAKIADCINIPEHRVLPVFCDVSPSEVRKQSGNYEKAFVEYEERFKEDEEMMEQVRRWRAALTQVASLSGWDLKDKSHSAEIEKIVKTVTKILSPRPSSSLSNDIVVGMEFSLQELGKLLVLDSDDDVRVVGICGMGGIGKTTLACRLYEKISHQYDVSCFMDDVSKTYRDCGSLGMKKQLLCPAFMEEDSLICNISMADNLIQNMLHYRKVLIVLDNVDQRIQLEKLALKRERLGRGSRIIIVSRDEHILREYEVDDVYKVQLLNDENANQLFCRKAFKRNHVAKDYESLTDSALAYANGLPLAIKVLGSFLFGRDVSEWSSALVRLKETPTKDIMDVLRISFDGLEDDEKDIFLDIACFFPNDIENYVKDILRIRGFHPDIGIKVLIEKSLITRDRWKITMHDLLRDLGRSIVREKSPKKPRKWSRLWNHKDLSNVLRENKPAENVEAIVLPTNDEIREELSLEALSKMSRLKLLKLGQVKVNFPGRLHFLSNELGYLSWKEYPFTCLPSSFQPTQLVKLILRHSNVKELWEGIKDLHKLTHLELCYSKSLVKIPNLSQAPNLSHINLKGCVKLVHLDTSIGALEKLSFLNLENCKSLVSIPSNVFGLRSLCDLNLSGCSKLIGYRLLENKQSVASSICKALTRPLNFRSSRRRANSVGLLVSSLSHFPLVTLDISFCNLVEIPDVIGQLHCLEDLNIGGNNIVMLPHSINELPKLRQLNLQYCKQLKWLPRNLLPLGGTSGRVHYGGIYGAICVFNCPNLSDNVGCCLAVISWMIKMIQVNMQSSSPRCVIQVVIPGTQIPRWFNNQKEGSSMKLDPSPILNDNNRIIGIACCVTFVVHDTPTQLPEEPKHAGDIGCGFRLRSGGTYFAVPIRLKKDFITTELDHMLLIFFSRDKIIDHYTSHLKEGRCDLDGIELATRSEYPEEIIQVKSCGYRWVCKEDLEQLNPTMMHSADSSTQNKKRKFLAIQ 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00645 1062 Gene3D - 11 187 IPR035897 -
Adu03g00645 1062 Gene3D Ribonuclease Inhibitor 536 725 IPR032675 -
Adu03g00645 1062 Pfam Leucine rich repeat 763 817 IPR001611 GO:0005515
Adu03g00645 1062 PRINTS Disease resistance protein signature 221 236 - -
Adu03g00645 1062 PRINTS Disease resistance protein signature 297 311 - -
Adu03g00645 1062 PRINTS Disease resistance protein signature 390 404 - -
Adu03g00645 1062 PRINTS Disease resistance protein signature 804 820 - -
Adu03g00645 1062 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 718 IPR044974 GO:0006952
Adu03g00645 1062 Pfam NB-ARC domain 211 425 IPR002182 GO:0043531
Adu03g00645 1062 Pfam C-JID domain 889 1036 IPR045344 -
Adu03g00645 1062 Gene3D Ribonuclease Inhibitor 726 833 IPR032675 -
Adu03g00645 1062 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 449 IPR027417 -
Adu03g00645 1062 SUPERFAMILY L domain-like 494 825 - -
Adu03g00645 1062 Pfam TIR domain 17 190 IPR000157 GO:0007165
Adu03g00645 1062 Gene3D - 188 350 IPR027417 -
Adu03g00645 1062 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Adu03g00645 1062 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 718 - -
Adu03g00645 1062 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 162 IPR035897 -
Adu03g00645 1062 Gene3D - 355 439 IPR042197 -
Adu03g00645 1062 Pfam Leucine Rich Repeat 609 628 IPR011713 -
Adu03g00645 1062 SMART till_3 17 159 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00645 Adu-Chr3 5948113 5962471 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00645 18 812 WRKY Transcription Factor Family AT4G12020 31.769 8.98e-93 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00645 - - mtr:MTR_4g080777 1137.87