Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00640 ATGACGAGCATAGTGAAGGAGATCCTGGCCAGCCCGATTCAGATGGCTGACACGGTCTCCAAGATGGCGGAAGAGGCGCAAAATTTCCGCAGCGATTGCCTCGACATCAAGGCCAAAACCGATAAGCTGGCCGCCCTGCTCCGCCAAGCCGCCAGGAACAGCAACGACCTGTACGAGAGGCCGACGCGCCGGATCATCGAGGACACCGAGCAGGTCCTCGACAAGGCCCTCATCCTCGTCGATAAATGCCGCGCCAACACCTTCATCAAACGCCTCTTCACCATCATCCCCACCACCGCACTCAAAAAAATATCCATGCAGCTGGAAAACTCCATCGGCGACGTCCAGTGGCTCCTCCGCGTCTCCGCCTCCGCAGACGAGCGCGATGACGAGTACCTCGGTCTCCCTCCAATCGCTTCCAACGAGCCCATCCTCTGCCTCATCTGGGAACAAATCGCAAACCTCCTCTCAAACGGCTCCGTGGAGGAACGCTCCGACGCCGCAGCCTCCCTTGTTTCCCTGGCTCGCGACAACGACCGTTACGGTAAACTCATCCTGGAAGAAGGCGGCGTTCCCCCTCTTCTCAAACTCTTAAAGGAAGGCAAGTTAGAAGGGCAACAGAACGCAGCAAGAGCCATCGGTTTACTCGGGAAGGATCCAGAGAGCGTGGAGCACATCGTTAACGCCGGCGTTTCTTCCGTGTTCGCCAAAATCCTGAAAGACGGTCACATGAAGGTTCAAATTGAGGTGGCTTGGGCAATTTCTGAATTAGCAGCGAATCACCCAAAGTGCCAAGATCATTTCTCACAGAACAATTGCATAAGGTTGCTGGTTAGTCATCTGGCTTTCGAAACCATTCAAGAGCACAGTAAATACGCCGTTGTCAACAAGCACAAGATGATGAATTCAAATCAGGATCACTTCCCCTCTCATCCCATGGGAGCCAACCAAGCAAGTACACAGATGCAGAATTTGGTTAATGCCGTTAAGGGTAACCAACCCACAGTTCCAGCAATAATGACGGATCATAGCAGTAACACTAACCCAAAGGTGGTTAGTGATGGCGGTGGAAATATGAATATGAATACGAATACTATAACAGGGGCGAGTAGTATCGGCGGGAGGGAGTATGAGGACCCGAAGACTAAGGCGGAGATGAAGGGGAAACCTCTCCATTTGCAACAACATAACAGAATCACGTGCTCTTCTCTGTTTTGCGGTTCTCTTAGAGAAAGGCACGGATGA 1245 0.5245 MTSIVKEILASPIQMADTVSKMAEEAQNFRSDCLDIKAKTDKLAALLRQAARNSNDLYERPTRRIIEDTEQVLDKALILVDKCRANTFIKRLFTIIPTTALKKISMQLENSIGDVQWLLRVSASADERDDEYLGLPPIASNEPILCLIWEQIANLLSNGSVEERSDAAASLVSLARDNDRYGKLILEEGGVPPLLKLLKEGKLEGQQNAARAIGLLGKDPESVEHIVNAGVSSVFAKILKDGHMKVQIEVAWAISELAANHPKCQDHFSQNNCIRLLVSHLAFETIQEHSKYAVVNKHKMMNSNQDHFPSHPMGANQASTQMQNLVNAVKGNQPTVPAIMTDHSSNTNPKVVSDGGGNMNMNTNTITGASSIGGREYEDPKTKAEMKGKPLHLQQHNRITCSSLFCGSLRERHG 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00640 414 SMART arm_5 219 259 IPR000225 GO:0005515
Adu03g00640 414 SMART arm_5 177 218 IPR000225 GO:0005515
Adu03g00640 414 Gene3D - 141 302 IPR011989 -
Adu03g00640 414 SUPERFAMILY ARM repeat 148 284 IPR016024 -
Adu03g00640 414 Gene3D - 3 121 IPR036537 GO:0007166
Adu03g00640 414 PANTHER ARMADILLO REPEAT ONLY 4 1 388 - -
Adu03g00640 414 Pfam Armadillo/beta-catenin-like repeat 219 259 IPR000225 GO:0005515
Adu03g00640 414 Pfam Armadillo/beta-catenin-like repeat 184 214 IPR000225 GO:0005515
Adu03g00640 414 PANTHER ARMADILLO REPEAT ONLY 1 1 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00640 Adu-Chr3 5881947 5883191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00640 152 295 U-box Gene Family AT1G23030 26.207 3.81e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00640 - - gmx:100807066 526.554