Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00630 ATGGGCAGAGTAATCTCTTTCCTCGTTCAGCCGCGATTCGTCCTTTTATACCTTGTGCTTTCAATCTTCATCATTTTCGCGCTCTACGGCTCTAAACAAGACGAGGTGATGATATTAGAAGAGGATCCTGAAATTACACACAGGGTTTTTTTGGATATTGATATTGATAAACAGCGCTTAGGTAGGATCGTGATTGGATTATATGGCCATGTTGTACCAAAAACTGTTGAAAATTTCAGAGCTTTGTGCACAGGGGAGAAAGGCAAGAGTTCTAGTGGCGTAAAACTTCACTACAAAGGAACACCACTTCATCGGATAATATCTGGTTTTGTGATTCAGGGTGGAGACATTGTTCATCGTGATGGCAAAGGATCTGAATCTATTTATGGTGGCACCTTTCCTGATGAGAATTTCAAGATAAAAAACTCTCATGCTGGTGTTGTTGCTATGGCAAATTCAGGACCTGATTCAAATGGCTCCCAGTTTTTTATTACCACAGTGAAGGCCTATTGGTTGGATGGTGAGCATGTTGTCTTTGGAAAGGTTATTCAAGGCATGGATAATGTGTTTGCGATCGAAGGGGGAGCTGGAACGTATAGCGGAAAACCCAGAAAGAAGGTGGTAATTGCAGATTGTGGAGAGATACCCAAGAGCCAGTGGGATGAGGAAATTTCAACTTCCAAATCAGTGACAACAACATAA 702 0.4174 MGRVISFLVQPRFVLLYLVLSIFIIFALYGSKQDEVMILEEDPEITHRVFLDIDIDKQRLGRIVIGLYGHVVPKTVENFRALCTGEKGKSSSGVKLHYKGTPLHRIISGFVIQGGDIVHRDGKGSESIYGGTFPDENFKIKNSHAGVVAMANSGPDSNGSQFFITTVKAYWLDGEHVVFGKVIQGMDNVFAIEGGAGTYSGKPRKKVVIADCGEIPKSQWDEEISTSKSVTTT 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00630 233 Gene3D - 38 221 IPR029000 -
Adu03g00630 233 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 50 214 IPR002130 GO:0000413|GO:0003755
Adu03g00630 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 67 82 IPR002130 GO:0000413|GO:0003755
Adu03g00630 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 115 IPR002130 GO:0000413|GO:0003755
Adu03g00630 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 146 161 IPR002130 GO:0000413|GO:0003755
Adu03g00630 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 161 173 IPR002130 GO:0000413|GO:0003755
Adu03g00630 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 174 189 IPR002130 GO:0000413|GO:0003755
Adu03g00630 233 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 39 223 - -
Adu03g00630 233 SUPERFAMILY Cyclophilin-like 43 215 IPR029000 -
Adu03g00630 233 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 39 223 - -
Adu03g00630 233 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 53 213 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00630 Adu-Chr3 5776225 5779488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00630 61 209 U-box Gene Family AT5G67530 42.000 2.46e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00630 - - gmx:100800775 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00630 03 5776225 5779488 Adu03g00630 03 5776225 5779488 ECH