Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00596 ATGGCTTTCCGCATTCCAGGTATTAGAAAGGCATCACTTTCTGCATCAAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTATATGTGGGAGATAAGATGAGGCGGTTTGTGATTCCTGTATGTCACTTGAACCAGCCTTCATTTCAAGAATTACTAAACCAAGCAGAAGAAGAATTCGGATATGATCATCCAACCGGTGGTCTCACAATTCCATGCAGTGAGGATGAGTTCTTAAATCTCACTTCTCTGTTGGGTGGCCAATAA 267 0.4195 MAFRIPGIRKASLSASKGTNVPKGYLAVYVGDKMRRFVIPVCHLNQPSFQELLNQAEEEFGYDHPTGGLTIPCSEDEFLNLTSLLGGQ 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00596 88 Pfam Auxin responsive protein 12 85 IPR003676 GO:0009733
Adu03g00596 88 PANTHER AUXIN-INDUCED PROTEIN 10A5 12 85 - -
Adu03g00596 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 12 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00596 Adu-Chr3 5503322 5503654 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00596 20 78 Calmodulin-binding Proteins AT3G43120 57.627 1.14e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00596 K14488 - gmx:100782363 140.584