Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00590 ATGGATTGCACGAGAAtccaaaccaccccgtaccatagtaagaactggaaatatgatgtgtttgtgagtttcagaggagagactcgtaacaacttcaccgatcatctttttgatgctctccgcagacacggcatactttccttcagggatgatactaagctcgagaaaggaggacctatatcagcagggcttctgcaagctattgaagaatcgcaggttctaattgtggtcttctcaatggactatgcttcgtccacatggtgcttgcaagaactcgcacagatagctgattgcattcaaataccaggacaccgtgttctgcctgttttctataatgtgagtccatctgaggtcagaaagcaaagtggaaattatgaaaaagcctttatggaacatgaagaaagattcaaagatgatgcagagatgatggagcaagtgcgaagatggagggcagcgctaacacaagtagccaatctctctggctgggatgtcaaggataaGTCACAATCTGCTGAGATTGAAAATATTGTGAAAGTGGTAACAAGCATTCTGAGTCCCAAACAATCATCAAGTCTATCTAATGATATAGTTGGGATGCATTCCCCTGTACAAGAATTAGAAAAGCTTCTAGTTTTGGACTCAGATGatgatgttcgagttgtagggatttgtggaatgggtggcataggaaagtcaactcttgccaccatcttatatgaaaaaatctcacatcaatatgatgcttcatgttttgtagatgatgtaagtagaatttacgaaggttatggtccacttggtgtacaaaagcaacttctttgtcaagctttcatggaagaaaattttccaacatgcaatctttcattggcaaataatctgattcaaactaggttacgccatagaaaggttctcatagttcttgataatgttgatcaagggattcaattggagaagttggctataaaaccggaatggctaggcagagggagtagaatgatcatagtttccagagatgagcatatattgagagagtatggagtggacgacgtttacaaagttaaactcttaaatgatgagaatgctctccaattgttttgcagaaaagctttcaaatgtaatcatgttgcaaaagattatgaaaacctgacaaattctgtgttaacatatgctaatggacttccgttagcaattagagtattgggctcatttttgtttgggcgagatgtctctgagtggagtagtgcattggttagactgaaagaaaatccaacaaaagatatcatggatgtgctacgaatcagttttgatggacttgagaatatggaaaaagaaatatttcttgatattgcatgtttctttcacaatgagtttgtaggatatgtaaaggatattttgaatattcgaggtttttatgctgatattggtataagaattcttattgataaatcactcataacttgtaatcactggggttggattgttatgcatgatctgttgcaagagttgggtagaagtattgttcgaggaaaatcacccaaagaaccaggaaaatggagcaggttatgggatcaaaaggatCTAAGATATGTCCAGCAAGAAAACAAGGCAGCAGAAAACCTTGAAGCCATAGTTCTGCCAAGATTTCATCAAAATAGAGAAGAGATGTCAGAAAGGACAACACTGAGTGTTGAAGCTTTATCACAAATGAGGCACCTTAAATTACTCATCCTCCAAGAAGTGAATTTTTTAGGACGTCTTGATTTTCTTTCTAACGAGTTGGGGTATCTTTATTGGGAAGACTATCCTTCTACATGTTTGCCATCAAGCTTTCAGCCAAATAAACTCGTTAAATTAATCCTACATTATAGCAACATCAAAGAACTATGGGAGGGAATAAAGGATCTACCAAAATTGACACATATAGTACTATGTGATTCTAAGAATCTTGTAAAGATACCAAACTTATCTCAGGCCCCAAATCTTGAGGAACTAAATCTTGAAGGATGTGTTAAACTTGTTCACCTTGATCCATCTGTTGGTTCTCTACTAAAGCTTCATTCCTTAAATCTGAACAACTGTAAAAGCCTTGTAAAGATACCCTACTTCTTATCTCCGACTCCAAGTCTTGAGGAGCTAAATCTTGCCGGATGCGATAAAGTTGTTCACTTTGATGCATCCGTTGGTTCTCTAGAAAAGCTTCGTTGCTTGAATTTGAAAAACTGCAAAAACCTTGTTAGTATTCCCAATTGCATATTTCGTCTTAATTCTCTTCAAAATTTAAATCTACCTGGCTGTTCAAAATTATTTAGATATCAGTTGTTAGAGAAACCAAGACAGATGCAAAGCTACATGACATCATCCATATGCAAAACTCTTACAAGGCCTCTCCATTTTTTATCTTCCAAAAGGCGTTTGAATTCAATTGGTTTATCGGTGTCTTCTTTGTCCCGTTTCCCAACTTTGACATATCTTGACATAAGTTTCTGTAATCTAGTTGAAATCCCTGATGCTATTGGACTGTTACATTGTTTAGAACGCTTAAATATAGGGGGAAACAATATTGTTACGCTACCATATTGCGTCAAGGAACTTCCCAAGCTAAGCGTGCTGAATTTGGAGCACTGTAAGAATCTAAAGTGCATGCCAAGTACACTTTTGCCGATCAGAAGAGTATATCATGGAGGAATATATGTTTTCAACTGCCCGAATTTGAGTGACACGGAAGGTTGTCGTGTGACAGTTATTTCATGGATGATAAGAATGATTCAGGTACCAACTTCAATTCCCTTTTTTCT 2792 0.1834 MDCTRIQTTPYHSKNWKYDVFVSFRGETRNNFTDHLFDALRRHGILSFRDDTKLEKGGPISAGLLQAIEESQVLIVVFSMDYASSTWCLQELAQIADCIQIPGHRVLPVFYNVSPSEVRKQSGNYEKAFMEHEERFKDDAEMMEQVRRWRAALTQVANLSGWDVKDKSQSAEIENIVKVVTSILSPKQSSSLSNDIVGMHSPVQELEKLLVLDSDDDVRVVGICGMGGIGKSTLATILYEKISHQYDASCFVDDVSRIYEGYGPLGVQKQLLCQAFMEENFPTCNLSLANNLIQTRLRHRKVLIVLDNVDQGIQLEKLAIKPEWLGRGSRMIIVSRDEHILREYGVDDVYKVKLLNDENALQLFCRKAFKCNHVAKDYENLTNSVLTYANGLPLAIRVLGSFLFGRDVSEWSSALVRLKENPTKDIMDVLRISFDGLENMEKEIFLDIACFFHNEFVGYVKDILNIRGFYADIGIRILIDKSLITCNHWGWIVMHDLLQELGRSIVRGKSPKEPGKWSRLWDQKDLRYVQQENKAAENLEAIVLPRFHQNREEMSERTTLSVEALSQMRHLKLLILQEVNFLGRLDFLSNELGYLYWEDYPSTCLPSSFQPNKLVKLILHYSNIKELWEGIKDLPKLTHIVLCDSKNLVKIPNLSQAPNLEELNLEGCVKLVHLDPSVGSLLKLHSLNLNNCKSLVKIPYFLSPTPSLEELNLAGCDKVVHFDASVGSLEKLRCLNLKNCKNLVSIPNCIFRLNSLQNLNLPGCSKLFRYQLLEKPRQMQSYMTSSICKTLTRPLHFLSSKRRLNSIGLSVSSLSRFPTLTYLDISFCNLVEIPDAIGLLHCLERLNIGGNNIVTLPYCVKELPKLSVLNLEHCKNLKCMPSTLLPIRRVYHGGIYVFNCPNLSDTEGCRVTVISWMIRMIQVPTSIPFF 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00590 930 PRINTS Disease resistance protein signature 389 403 - -
Adu03g00590 930 PRINTS Disease resistance protein signature 220 235 - -
Adu03g00590 930 PRINTS Disease resistance protein signature 861 877 - -
Adu03g00590 930 PRINTS Disease resistance protein signature 296 310 - -
Adu03g00590 930 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 695 771 IPR044974 GO:0006952
Adu03g00590 930 Gene3D Ribonuclease Inhibitor 790 909 IPR032675 -
Adu03g00590 930 Gene3D Ribonuclease Inhibitor 538 703 IPR032675 -
Adu03g00590 930 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 162 IPR035897 -
Adu03g00590 930 SMART till_3 17 159 IPR000157 GO:0007165
Adu03g00590 930 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 695 771 - -
Adu03g00590 930 Pfam Leucine rich repeat 818 875 IPR001611 GO:0005515
Adu03g00590 930 Gene3D - 12 182 IPR035897 -
Adu03g00590 930 Pfam NB-ARC domain 203 424 IPR002182 GO:0043531
Adu03g00590 930 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 695 - -
Adu03g00590 930 Pfam Leucine Rich Repeat 613 632 IPR011713 -
Adu03g00590 930 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 448 IPR027417 -
Adu03g00590 930 Pfam TIR domain 17 190 IPR000157 GO:0007165
Adu03g00590 930 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 695 IPR044974 GO:0006952
Adu03g00590 930 Gene3D Ribonuclease Inhibitor 704 789 IPR032675 -
Adu03g00590 930 Gene3D - 183 350 IPR027417 -
Adu03g00590 930 SUPERFAMILY L domain-like 494 903 - -
Adu03g00590 930 Gene3D - 354 438 IPR042197 -
Adu03g00590 930 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00590 Adu-Chr3 5428630 5491172 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00590 10 846 WRKY Transcription Factor Family AT4G12020 29.909 2.08e-90 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00590 - - aip:107628789 1296.57