Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00589 ttccgctcttaaatgatgagaatgctctccaattgttttgcagaaaagctttcaaatgtaatcacgttgcaaaagattacgagagcctgacagattctgcattagaatatgctaatggacttcctttagcgattaaagtgttgggctcatttttgtttgggcgagatgtctccgaatggagtagtgcattagttagattgaaagaaaagccaacaaaagatattctggatgtactacgaatcagttttgatggacttgaggatatggaaaaggaaatatttcttgatatcgcttgtttcttttcaagaagtgatgaaaattacgtgaaagatattttacgtattcgaggattttatcctgagattggtataagaattctcattgataaatcactcataactcttgatagatggatgatagttatgcacgatctgttgagagagttgggtagaagtattgttcgagaaaaatcaccccacgagccaagaaagtggagcaggttatggaatgaaaaggatataagcaatgtcttacgagaaaacaagATAGCAGAAAACCTTGAAGCCATAGTTCTGAAAGAATTTTTTGAAATCAGGGAAGAGTTGCAAGTTGAAGCTTTATCACAAATGAGTAAACTGAAATTGCTTATTATATTTGGAGCTTTGAATTTCTCAGGATACCTGCATTTTCTTTCTAATGAGTTGGGATATCTTGAATGGCAAAAATATCCTTTCACATGTTTGCCATCAAGCTTTCAGCCAAATAAACTCGTTCAACTAATCCTGCATCATAGCAACATCAAAGAACTCTGGAAGGGAATAAAGGTATGA 830 0.1193 PLLNDENALQLFCRKAFKCNHVAKDYESLTDSALEYANGLPLAIKVLGSFLFGRDVSEWSSALVRLKEKPTKDILDVLRISFDGLEDMEKEIFLDIACFFSRSDENYVKDILRIRGFYPEIGIRILIDKSLITLDRWMIVMHDLLRELGRSIVREKSPHEPRKWSRLWNEKDISNVLRENKIAENLEAIVLKEFFEIREELQVEALSQMSKLKLLIIFGALNFSGYLHFLSNELGYLEWQKYPFTCLPSSFQPNKLVQLILHHSNIKELWKGIKV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00589 275 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 3 266 - -
Adu03g00589 275 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 266 IPR044974 GO:0006952
Adu03g00589 275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 96 IPR027417 -
Adu03g00589 275 Gene3D - 2 86 IPR042197 -
Adu03g00589 275 SUPERFAMILY "Winged helix" DNA-binding domain 73 177 IPR036390 -
Adu03g00589 275 Pfam Leucine Rich Repeat 255 274 IPR011713 -
Adu03g00589 275 Pfam NB-ARC domain 2 72 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00589 Adu-Chr3 5420990 5421897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00589 3 274 WRKY Transcription Factor Family AT5G45050 33.898 6.02e-44 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00589 - - adu:107477017 550.436