Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00588 ATGAATCTTGTGAAGATACCAAACTTATCTCAGGCCCCAAATCTTGAGGTACTAAATCTTGAAGGATGTGTTAAACTTGTTCACCTTGATCCATCTGTTGGTTCTCTAGAAAAACTTCGTATCTTGAGTCTGAAACGCTGCGAAAGCCTTGTAAAGATACCCATCTTAGCTCGGACTCCAAATCTTGAGAAGTTAAATCTTTCAGGATGTGATAAACTTGTTCACCTTGATTTATCTATTGGTTCTCTAGAAAAACTTGCTTTCATGAATCTGGAACGCTGCAAAAGCCTTGTAAAGATACTCATCTTAACTCGGACTCCAAATCTTGAGCAGTTAAATCTTTCAGGATGTGATAAACTTGTTCACCTTGATTTATCTATTGGTTCTCTAGAAAAACTTCGTTTCATATATTTGGAAAACTGCAAAAATCTTGTTAGTATTCCCAATGGCATATTTCATCTTAATTCTCTTAAACATTTATATCTATCTGGCTGTTCGAAGTTATTTAAATATCAGTTGTTAGAGAATCCAAGACAGAGCGAGCAGTTGAATTCAGGTCAAAGTGTGCAAAGCCACATGACATCATCCATATGCAAAACTCTTACAAGGCCTCTCCATTTTTTATTTTCTAGAAGGTGTTCGAATTCAGTTGGTTCATTGGTGCCTTCTTTGTCCCGTTTCCCAGCTTTGGTATTTCTTGACATAAGTTTCTGTAATCTAGTTCAAATCCCTGATGCTATTGGACAGTTACGTTGTTTAGAAGTATTAAACATAGGGGGAAACAATTTTGTTACGCCACCTGATTGCATCAAGGAACTTCCCAAGCTAAGGGTGTTGAACTTGGAGCACTGTAAGCATCTAAAGTGGTTGCCTAGTACCTTTATGCCGATAGCAGGGATCAGTGGAAGATATTGCCATGGAGGAATATATGTTTTCAACTGCCCGAGTTTGAGTGACAGGGAAGGTTGTGGTGTGACAGTTATTTCATGGATGATAAAAATGATTCAGCTGAACCCGCGATGCAGCATTGAAGGTGTTGTTCCAGGAACTAAAATTCCAAGGTGGTTCAGCAAACAGAACACGGGTGGTTCAGTGAGCCTTGATCCATCTCCCATTGTGGATGACAATAATTGGATTGGCATTGCTGCTTGTGAATTTTTAAacatcatctag 1173 0.3836 MNLVKIPNLSQAPNLEVLNLEGCVKLVHLDPSVGSLEKLRILSLKRCESLVKIPILARTPNLEKLNLSGCDKLVHLDLSIGSLEKLAFMNLERCKSLVKILILTRTPNLEQLNLSGCDKLVHLDLSIGSLEKLRFIYLENCKNLVSIPNGIFHLNSLKHLYLSGCSKLFKYQLLENPRQSEQLNSGQSVQSHMTSSICKTLTRPLHFLFSRRCSNSVGSLVPSLSRFPALVFLDISFCNLVQIPDAIGQLRCLEVLNIGGNNFVTPPDCIKELPKLRVLNLEHCKHLKWLPSTFMPIAGISGRYCHGGIYVFNCPSLSDREGCGVTVISWMIKMIQLNPRCSIEGVVPGTKIPRWFSKQNTGGSVSLDPSPIVDDNNWIGIAACEFLNII 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00588 390 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 96 370 IPR044974 GO:0006952
Adu03g00588 390 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 54 IPR044974 GO:0006952
Adu03g00588 390 Pfam Leucine rich repeat 230 285 IPR001611 GO:0005515
Adu03g00588 390 SUPERFAMILY L domain-like 2 288 - -
Adu03g00588 390 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 2 54 - -
Adu03g00588 390 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 47 98 - -
Adu03g00588 390 Gene3D Ribonuclease Inhibitor 1 102 IPR032675 -
Adu03g00588 390 Gene3D Ribonuclease Inhibitor 191 320 IPR032675 -
Adu03g00588 390 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 96 370 - -
Adu03g00588 390 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 98 IPR044974 GO:0006952
Adu03g00588 390 Gene3D Ribonuclease Inhibitor 103 177 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00588 Adu-Chr3 5410560 5411830 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00588 3 172 WRKY Transcription Factor Family AT5G45050 37.059 1.64e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00588 - - adu:107477017 791.571