Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00580 ATGGCTTTTCGCATTCCAAGTATTAGAAAGGCATCACTTTCTGCATCAAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGAGGAGGTTTCTGATTCCTGTATATTACTTGAACCAACCTTTATTTCGAGAGTTACTAAGCCAATCAGAAGAAGAATTCGGTTATGATCACCCAACTGGCGGTCTCACAATTCCTTGCAGCGAGGATGCCTTCCTGAACCTCACTTGTCAATTAAGTGGGCAGTAA 267 0.4195 MAFRIPSIRKASLSASKGTNVPKGYLAVYVGDKMRRFLIPVYYLNQPLFRELLSQSEEEFGYDHPTGGLTIPCSEDAFLNLTCQLSGQ 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00580 88 Pfam Auxin responsive protein 10 84 IPR003676 GO:0009733
Adu03g00580 88 PANTHER AUXIN-INDUCED PROTEIN 10A5 11 86 - -
Adu03g00580 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00580 Adu-Chr3 5388378 5388644 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00580 20 78 Calmodulin-binding Proteins AT3G43120 57.627 1.99e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00580 K14488 - gmx:100806671 135.961