Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00562 ATGGGTTTCCGTTTGCCTGCTATTCGAAGAACATCATCGTTCTCAGCTAGGCAAGCAGCTTCAAAATCTGTAGAAGTCCCAAAGGGGTATCTTGCAGTGTATGTCGGAGAAAACCAGAAGCGTTTTGTGATCCCCATTTCATATTTGAACCAACCTTCATTCCAAGACCTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGAGGTCTCACAATTCCTTGCAGTGAAGATTTTACCTACCCAACCCATGATCCGAAGAAAGTTACAAACTTTCCGTTTACTTTTGAGCTGGGAAACGCAATAGAAGCTTCTGGAGCTTCCCTTCGACTTCAAGGAGCTTTCCCAACCTCTTGGGTGACACTGGCTTGTGATCATGCTAGTGTGCTACAGGCATCATTCTCTGCTAGCCAAGCGGCTTCAAAATCTGTAGAAGTCCCAAAGGGGTATCTTGCAGTGTATGTTGGAGAAGAACAAAAGCGATATGTCATCCCAATTTCATACTTGAATCAACCTTCATTCCAAGACTTGTTGAATCAAGCTGCGGAAGAGTTTGGATATGATCATCCCAAGGGAGGTCTCACAATTCCTTGCAGTGAACACGTCTTCCAGCAAATCACTTCTCGTTTGAATTGA 645 0.4434 MGFRLPAIRRTSSFSARQAASKSVEVPKGYLAVYVGENQKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDFTYPTHDPKKVTNFPFTFELGNAIEASGASLRLQGAFPTSWVTLACDHASVLQASFSASQAASKSVEVPKGYLAVYVGEEQKRYVIPISYLNQPSFQDLLNQAAEEFGYDHPKGGLTIPCSEHVFQQITSRLN 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00562 214 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 3 81 IPR003676 GO:0009733
Adu03g00562 214 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 130 214 IPR003676 GO:0009733
Adu03g00562 214 PANTHER AUXIN-INDUCED PROTEIN 6B 130 214 - -
Adu03g00562 214 PANTHER AUXIN-INDUCED PROTEIN 6B 3 81 - -
Adu03g00562 214 Pfam Auxin responsive protein 12 82 IPR003676 GO:0009733
Adu03g00562 214 Pfam Auxin responsive protein 137 212 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00562 Adu-Chr3 5334157 5336665 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00562 25 84 Calmodulin-binding Proteins AT3G43120 57.377 1.32e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00562 - K14488 aip:110269930 241.506