Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00557 ATGTCGCCATCGAACGGAAGCAGCAGCAAGATCCGGCGAATAGTACGGATCCGGCAGATGCTAATGCGGTGGAGGAAGAAGGCGGCGGGTAGAGCGGCGGCGGACGTGCCGGCGGGACACGTGGCGGTGTGTGTTGGACCTAGCATGAGGAGGTTCATCGTGCGCGCGACGCAGTTGAATCACCCGATCTTCCAGAAGCTTCTGCTTCAAGCGGAAGAAGAATACGGTTTCTGTAACCATGGACCTCTCGCTATTCCTTGCGACGAAGAGCTATTCGAGGAGCTTCTTCGTGTCATGACCCGACCCGAATCCGTTTTCTCTACTTCTCTCGAAGAGTTTCAGAGAAGGTGCCACGTGGACTTCCGAAGTCAGGGTGATGGTAGCGGTAAAAAAGGTGGTGGTCGTGGAGAATCGTGGCCGTTGCTTCATGACGAGTTGATTTACTGA 447 0.5503 MSPSNGSSSKIRRIVRIRQMLMRWRKKAAGRAAADVPAGHVAVCVGPSMRRFIVRATQLNHPIFQKLLLQAEEEYGFCNHGPLAIPCDEELFEELLRVMTRPESVFSTSLEEFQRRCHVDFRSQGDGSGKKGGGRGESWPLLHDELIY 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00557 148 PANTHER SMALL AUXIN-UP RNA-RELATED 6 129 - -
Adu03g00557 148 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 129 IPR003676 GO:0009733
Adu03g00557 148 Pfam Auxin responsive protein 18 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00557 Adu-Chr3 5283749 5284523 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00557 6 121 Calmodulin-binding Proteins AT4G34750 51.938 2.99e-40 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00557 K14488 - gmx:100795345 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00557 03 5283749 5284523 Adu03g00557 03 5283749 5284523 ECH