Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00554 ATGGGTGACAATGAAGACTCCAACAACAATAATGACATGATGCAAAGGCTTCAATCCTCATTCGGAACGACGTCGTCTTCGTCTTCTTCGTTTCTCAAACAGACTCTTACCATGGAGCAGCTCACAATACCCCAATTCCAACAAATGCGTGCTAATAACAATAATCAGCAACAACATTTCTACGGTGGAGATGGAATGAAGCGTGCGGGTATACCACCGTCTCACCCGCACCAGATCCCGCCCATTTCCCCATACTCTCAGATCCCGCGCTCCACACTCACTCACCACCAAATGGGTTCACCTACACCCACCCACACCCGATCCCTATCCCAACCATCGTTCTTCTCACTCGACTCTCTCCCACCGCTAAGCCCCTCTCCCTTCCGCGGCGCTGACTCCTCAACTTCAATCTCCGACCAAGCCTCCGCTGACGTCTCCATGGAAGATCGTGACGTCAGCAGCCACCAACAGCAACAGCAACAACACTCTCTCCTCCCTCCGTCTTCGCCTTTCTCATCTGCCCGGGGCACCGGCAACCCGCTGCCCCCTCCTCGGAAAACGCACCGTCGCTCCAACAGCGATATACCGTTTGGATTCTCCACCATTTTGCAGTCGTCGCCGCCGCTGATTCCGTTGAAGAAGCCTGCGCAGCTTGTTAAGAAGGAATCTGGTTCCTGGAGTAGCGCTGATCCCAATGCGGAGGGATCAGGGGAGAAGAAGCTCTCCCCTGAAGGTGAAGTAGTTGATGATCTTTTCTCTGCTTACATGAACTTGGATAGCATCAATGACGCGTTTAACAATAATTCATCTGATGAGAAGAACGGTAACGAGATTATTATTAATAATAACAATAGTAATCGTGATGATTTGGATAGTAGAGCTAGTGGAACCAAGACTAGTAACAACAATGGTGGTGGTGACAGTAGTGATAATGAAGCTGAGAGTAGCGGCAACTCAATGATGAGTCAGAGTTGTGGGGAGAAGAGGGATGGTGTTAAGAAGAGGAGTGCTGCTGGTGAGGTTGTTGGCGGCGTCGCTCCCACGAGCCGCCACTATAGGAGTGTGTCTATGGATAGTTTCATTGGCAAGTTGAATTTCAATGATGAGTCGCCAAGGTTGCCGCCATCGCCTGGGTCTGCTCGGCCGCCTTCCTCGAATGGAATTGATGGGAACACTGGTGCTTTCAGCTTGGAGTTTGGGAATGGTGAGTTTAGTGGCCCTGAGTTGAAGAAGATCATGGCCAATGAGAAGCTTGCTGAGATTGCTATGATGGATCCTAAGCGTGCAAAGAGGATTCTGGCCAATCGGCAGTCAGCTGCACGATCCAAAGAAAGGAAGATGCGGTACATTTCTGAGCTGGAACATAAGGTCCAGACCCTACAAACTGAGGCCACCACACTCTCTGCACAGCTTACTCTGTTGCAGAGGGATTCTGTTGGACTCACTAACCAAAATAGTGAGCTTAAATTTCGCCTTCAATCCATGGAACAACAGGCAAAACTCCGAGATGCTCTAAACGAGGCTCTCACTGCCGAGGTTCAACGACTAAAGCTCGCTACGGCCGAGCTGAACGGGGAGTCGCACTCATCCGGTTGCTTGATTCCGCAACATTCTGTCAACCCTCTGATGTTTCAGCAGCAGCAGCAAGCTTCTACTGCATCTCAACAAAATATTCATCTTCAACAACAGCGGCAGAATGGTAATACCAACTCACAAACCGATCTAAAACAATAA 1734 0.4983 MGDNEDSNNNNDMMQRLQSSFGTTSSSSSSFLKQTLTMEQLTIPQFQQMRANNNNQQQHFYGGDGMKRAGIPPSHPHQIPPISPYSQIPRSTLTHHQMGSPTPTHTRSLSQPSFFSLDSLPPLSPSPFRGADSSTSISDQASADVSMEDRDVSSHQQQQQQHSLLPPSSPFSSARGTGNPLPPPRKTHRRSNSDIPFGFSTILQSSPPLIPLKKPAQLVKKESGSWSSADPNAEGSGEKKLSPEGEVVDDLFSAYMNLDSINDAFNNNSSDEKNGNEIIINNNNSNRDDLDSRASGTKTSNNNGGGDSSDNEAESSGNSMMSQSCGEKRDGVKKRSAAGEVVGGVAPTSRHYRSVSMDSFIGKLNFNDESPRLPPSPGSARPPSSNGIDGNTGAFSLEFGNGEFSGPELKKIMANEKLAEIAMMDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKLATAELNGESHSSGCLIPQHSVNPLMFQQQQQASTASQQNIHLQQQRQNGNTNSQTDLKQ 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00554 577 SMART brlzneu 423 487 IPR004827 GO:0003700|GO:0006355
Adu03g00554 577 MobiDBLite consensus disorder prediction 261 338 - -
Adu03g00554 577 Pfam bZIP transcription factor 427 481 IPR004827 GO:0003700|GO:0006355
Adu03g00554 577 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 109 572 - -
Adu03g00554 577 MobiDBLite consensus disorder prediction 84 120 - -
Adu03g00554 577 MobiDBLite consensus disorder prediction 152 176 - -
Adu03g00554 577 SUPERFAMILY Leucine zipper domain 427 478 IPR046347 GO:0003700|GO:0006355
Adu03g00554 577 MobiDBLite consensus disorder prediction 47 245 - -
Adu03g00554 577 MobiDBLite consensus disorder prediction 261 325 - -
Adu03g00554 577 MobiDBLite consensus disorder prediction 366 393 - -
Adu03g00554 577 MobiDBLite consensus disorder prediction 128 143 - -
Adu03g00554 577 MobiDBLite consensus disorder prediction 1 31 - -
Adu03g00554 577 Coils Coil 443 477 - -
Adu03g00554 577 Coils Coil 506 526 - -
Adu03g00554 577 MobiDBLite consensus disorder prediction 47 61 - -
Adu03g00554 577 CDD bZIP_plant_RF2 428 477 IPR044759 GO:0003700|GO:0006355
Adu03g00554 577 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 425 488 IPR004827 GO:0003700|GO:0006355
Adu03g00554 577 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 109 572 - -
Adu03g00554 577 MobiDBLite consensus disorder prediction 545 577 - -
Adu03g00554 577 MobiDBLite consensus disorder prediction 193 207 - -
Adu03g00554 577 Gene3D - 426 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00554 Adu-Chr3 5244816 5248848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00554 1 546 bZIP Transcription Factor Family AT4G38900 54.497 1.99e-162 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Adu03g00554 bZIP_1 8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00554 - - aip:107628829 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00554 03 5244816 5248848 Adu03g00554 03 5244816 5248848 ECH