Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00539 ATGGAGTTTTTTCTACACACTTTTCAATCTTCAACCACCATTTTTATTTTCTTCTCTGTCTTGGCTTTCACTGTCTTCTTCATCTTTCGACTTCGTCGAAAGCTACCATACCCACCAGGCCCAAAAGGCCTACCCATCATAGGAAGCATGTTAATGATGGACCAACTTACCCATCGGGGCCTGGATAAGCTCGCCAAACAATATGGTGGGCTTGTTCATCTCCAAATGGGCTCCCTCCATATAGTGGCAATATCAACACCACAAATGGCCCGTGAGGTTCTCCAGGCCCAAGATAGCGCTTTCGCAAATCGGCCCGCAAATGTTGCAATTTCTTACTTGACATACGACCGGGCCGACATGGCTTTCGCAAACTACGGCCCGTTTTGGCGGCAGATGCGTAAGATCTGTGTAATGAAGCTTTTTAGTCGCAAGCGGGCCGAGTCATGGGCCTCGGTTCGTGAAGAAGTTGAAGAAACGGTTCGAACCATATCAGCGAACCTTGGTTCAGCCATGAATTTGGGTGAATTGATTTTTGCTCTAACGAGGAGGGTCACCTATAAGGCCGCGTTTGGTGCGAGTTTAAATAAGGGGGAAGAGGAATTCATGGGAATCTTACAAGAGTTTTCAAAGCTTTTTGGAGCTTTTAACATTGCAGATTTCATTCCGTGGTTGGGTTGGTTGCATGCACAAGATTTTCACAAGAGATTGGTCAATGCACGAAAAGCACTTGATGTGTTTATTGATGAGATCATTGATGATCATATCAAAAAGAGGAACATCAACATGGAGAATGATAATGATGCAGATAAAGATATGGTTGATGAGCTTATGGATTTTCTTAATGAAGGTAGTGTTGGTGATGATGCTGTGAAGCCAAACAATTCACCATCAATCCTTAAGCTTACTAGAGACAATATCAAAGCTCTTATCATGGATGTCATGTTTGGAGGAACTGAGACAGTAGCATCAGTGATTGAATGGATTATGGCGGAGCTTTTGAGAAGCCCAATGGATCTTCACAAGGTCCAACAAGAGCTTGTTGATGTTGTGGGCTTGGGCCGAAGGTTCAATGAATCGGATCTCGAAAAGTTGACTTTCCTCAAGTGCGTGGTCAAAGAAGCCTTGCGTCTCCACCCTCCAATTCCAATGGCTCTTCACGAGAGCGCAGAGGACAGCGTCATTGAGGGTTACGCAATCCCAAAGGGGACACGTGTCTGGATCAACGCGTGGTCTACAGGACGCGACAGCAGCGCGTGGGATGAGCCTGAGACATTCAATCCTTCAAGATTCTTGCGAGAAGCCGCACCCGATTTCAAAGGAAGCGATTTCGAGTTCATTCCATTTGGGTCGGGCCGAAGGTCATGCCCAGGGATGCAACTTGGGCTTTATACTGTGGAGTTAACAGTGGCCCATTTGCTTCATTGCTTCAATTGGGAGTTGCCCAATGGAATGAAGCCCGAGGATCTTGATATGAGTGATACTTTTGGGCTCACAGCTCCAAGAGCAGTTCAACTTGTTGCGGTACCTACTTATCGTCTCAAGTGCCCTCTTTATTAA 1557 0.4599 MEFFLHTFQSSTTIFIFFSVLAFTVFFIFRLRRKLPYPPGPKGLPIIGSMLMMDQLTHRGLDKLAKQYGGLVHLQMGSLHIVAISTPQMAREVLQAQDSAFANRPANVAISYLTYDRADMAFANYGPFWRQMRKICVMKLFSRKRAESWASVREEVEETVRTISANLGSAMNLGELIFALTRRVTYKAAFGASLNKGEEEFMGILQEFSKLFGAFNIADFIPWLGWLHAQDFHKRLVNARKALDVFIDEIIDDHIKKRNINMENDNDADKDMVDELMDFLNEGSVGDDAVKPNNSPSILKLTRDNIKALIMDVMFGGTETVASVIEWIMAELLRSPMDLHKVQQELVDVVGLGRRFNESDLEKLTFLKCVVKEALRLHPPIPMALHESAEDSVIEGYAIPKGTRVWINAWSTGRDSSAWDEPETFNPSRFLREAAPDFKGSDFEFIPFGSGRRSCPGMQLGLYTVELTVAHLLHCFNWELPNGMKPEDLDMSDTFGLTAPRAVQLVAVPTYRLKCPLY 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00539 518 Pfam Cytochrome P450 38 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu03g00539 518 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu03g00539 518 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu03g00539 518 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu03g00539 518 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 8 517 - -
Adu03g00539 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Adu03g00539 518 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu03g00539 518 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu03g00539 518 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu03g00539 518 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu03g00539 518 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu03g00539 518 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu03g00539 518 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu03g00539 518 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu03g00539 518 Gene3D Cytochrome P450 30 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu03g00539 518 PANTHER CYTOCHROME P450 84A1-RELATED 8 517 - -
Adu03g00539 518 SUPERFAMILY Cytochrome P450 38 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00539 Adu-Chr3 5082342 5085324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00539 45 517 Monolignol Biosynthesis Gene Families AT4G36220 66.250 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00539 K09755 - zju:107426594 734.947