Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00523 ATGGCCTCCGATTCTTCTCCCATCAACAACGGTCCTTCATCCCCCGACGATTCCCCTTCAAGCCCAATCGGCAACACCTTCTCCTCCCCCGGCGCCGGCCGTCCTCCGGTTACTCCGACCTCCACCGATGACATTCCGGCGTCTTCTGAAGGCGGTGATGGCTTCGACATGGATGACGCCAGGCCTACCTTCGTTTGGGGCACGAACATCAGCGTTGAGGACGTTAACGACGCGATTCAGAGGTTCCTGAGGGACTTTCGAGAAGCTTCTTCGTCACAGAATGATGATGACATGTTGCAGCACTTGCATACCGAAGGGAAGTACGAGAAGCTTATCAAACAGGTGATTGAAGTGGAGGGAGATTCCCTTGATGTTGATGCGCATGATGTGTTCGAACATGACCCTGATTTGTACACCAAGATGGTTAGGTACCCTCTCGAGGTTCTTGCGATCTTTGACTTGGTTCTTATGAATATGGTTAGCAGGATTAAGCCTATGTTCGAGAAGCACATTCAGACTCGGATTTTCAATCTCAAATCCTCCACTACAATGAGGAATTTGAATCCTACTGGAATTTTACTGATTATACGGTGTAGCTCAATCATACCGGAAATTAGGGAAGCTATATTTAGGTGTCTTGTGTGTGGGAACTGCACCGACCCTGTTGCTGTAGAGAGAGGACGTATAACCGAGCCAACTATATGCTTGAGAGAAGAGTGTCAATCCAGGAACTCCATGACACTGCTTCACAACCGATGCAGGTTTACTGATAAGCAAATTGTGAGGCTCCAGGAGACACCTGATGAGATACCTGAAGGTGGAACTCCTCACACAGTGAGCTTGCTAATGCATGACAAGCTGGTAGATGCTGGAAAGCCTGGAGATAGAGTTGAGGTGACTGGTATATATAGAGCTATGAGTGTCAGAATTGGAGCAACTCAGCGAACTGTGAAATCATTGTTCAAGACGTATATTGATTGTCTTCACATAAAGAAGACTGATAAGTCAAGGATGCTGGTAGACGATGCTATGGACATTGACAATAGCGAGGGCAGAAATCCAGAAGAGGTTCACTTTGATGAAGAAAGGGTGGGTCAACTGAAAGAGCTCTCAAAACAGCCAGATATATATGAAAGATTGACAAAGTCATTGGCACCAAATATCTGGGAACTAGACGATGTGAAAAAAGGTCTTCTTTGTCAGCTTTTTGGTGGCAATGCTTTGAAGTTGGCATCTGGTGCTAGCTTCCGTGGTGATATCAATATTCTTCTTGTTGGTGATCCTGGTACTAGCAAGTCTCAGCTTCTTCAATACATTCACAAACTATCTCCTCGTGGCATTTACACTAGTGGAAGAGGGAGTTCTGCAGTTGGATTGACTGCTTACGTGACCAAGGACCCTGAAACAGGGGAAACTGTTCTTGAAAGTGGTGCCCTAGTTTTGAGTGACCGAGGTATTTGCTGTATAGATGAATTTGACAAAATGTCTGACAATGCAAGGAGCATGTTACATGAGGTGATGGAACAGCAAACTGTTTCTATAGCGAAGGCTGGTATTATTGCTTCTCTCAATGCTAGGACTTCCGTGTTGGCTTGTGCAAATCCAAGTGGGTCACGATATAATCCTCGCTTGTCTGTCATTGACAACATACACCTGCCTCCCACTCTTTTGTCCAGGTTCGATTTAATTTACTTAATTCTTGACAAGGCTGATGAACAGACTGACCGGCGACTTGCCAAACATATTGTTTCCTTACACTTCGAGAATCCCGAGAGCATGGAGCAAGATGTGATGGACATATCTACCTTGACTGATTATGTGAGCTATGCCCGAAAGCACATACACCCCCAGCTGTCTGATGAAGTTGCCGAAGAATTGACTAGAGGTTATGTGGATATAAGAAGAAGAGGAAACTTTCCTGGAAGTAGCAAAAAGGTGATAACAGCAACGCCAAGACAGCTTGAGAGTCTGATACGCCTTAGTGAAGCATTGGCCCGGATTCGCTTCGCAGAATGGGTTGAAAAGCGTGATGTAATGGAGGCATTTCGGCTTCTTGAAGTTGCAATGCAGCAATCTGCAACGGATCACGCTACTGGAACTATCGACATGGATCTTATTACTACTGGAGTTTCGGCAAGTGAAAGAATGAGACGAGAAGCTATGGTACAAGCAACCCGCAACATAATCATGGAGAAGATACAAATTGGGGGACCATCCATGCGATTATTGGAGCTATTGGAAGAGTTAAAACAGAGCACTGGCAGTGAAGTTCAAATTACTGATCTAAAGAATGCAGTTGCTACTCTCGCCAGTGAAGGATTCGTTACCATGCATGGTGAAAGCGTTAAAAGATCATGA 2358 0.4538 MASDSSPINNGPSSPDDSPSSPIGNTFSSPGAGRPPVTPTSTDDIPASSEGGDGFDMDDARPTFVWGTNISVEDVNDAIQRFLRDFREASSSQNDDDMLQHLHTEGKYEKLIKQVIEVEGDSLDVDAHDVFEHDPDLYTKMVRYPLEVLAIFDLVLMNMVSRIKPMFEKHIQTRIFNLKSSTTMRNLNPTGILLIIRCSSIIPEIREAIFRCLVCGNCTDPVAVERGRITEPTICLREECQSRNSMTLLHNRCRFTDKQIVRLQETPDEIPEGGTPHTVSLLMHDKLVDAGKPGDRVEVTGIYRAMSVRIGATQRTVKSLFKTYIDCLHIKKTDKSRMLVDDAMDIDNSEGRNPEEVHFDEERVGQLKELSKQPDIYERLTKSLAPNIWELDDVKKGLLCQLFGGNALKLASGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPESMEQDVMDISTLTDYVSYARKHIHPQLSDEVAEELTRGYVDIRRRGNFPGSSKKVITATPRQLESLIRLSEALARIRFAEWVEKRDVMEAFRLLEVAMQQSATDHATGTIDMDLITTGVSASERMRREAMVQATRNIIMEKIQIGGPSMRLLELLEELKQSTGSEVQITDLKNAVATLASEGFVTMHGESVKRS 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00523 785 Pfam MCM AAA-lid domain 602 688 IPR041562 -
Adu03g00523 785 SUPERFAMILY Nucleic acid-binding proteins 102 327 IPR012340 -
Adu03g00523 785 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 199 212 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Adu03g00523 785 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 250 262 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Adu03g00523 785 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 538 555 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Adu03g00523 785 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 690 699 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Adu03g00523 785 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 392 403 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Adu03g00523 785 MobiDBLite consensus disorder prediction 1 47 - -
Adu03g00523 785 CDD MCM4 379 688 - -
Adu03g00523 785 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 36 784 IPR031327 GO:0003677|GO:0005524|GO:0032508
Adu03g00523 785 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 387 703 IPR027417 -
Adu03g00523 785 Gene3D - 69 177 - -
Adu03g00523 785 MobiDBLite consensus disorder prediction 1 60 - -
Adu03g00523 785 PRINTS Mini-chromosome maintenance (MCM) protein family signature 417 432 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu03g00523 785 PRINTS Mini-chromosome maintenance (MCM) protein family signature 505 518 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu03g00523 785 PRINTS Mini-chromosome maintenance (MCM) protein family signature 529 541 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu03g00523 785 PRINTS Mini-chromosome maintenance (MCM) protein family signature 556 564 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu03g00523 785 PRINTS Mini-chromosome maintenance (MCM) protein family signature 477 491 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu03g00523 785 ProSiteProfiles MCM family domain profile. 376 582 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu03g00523 785 Gene3D - 204 256 - -
Adu03g00523 785 PANTHER DNA REPLICATION LICENSING FACTOR MCM4 36 784 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Adu03g00523 785 ProSitePatterns MCM family signature. 485 493 IPR018525 GO:0003677|GO:0005524|GO:0006260
Adu03g00523 785 Gene3D - 354 694 IPR027417 -
Adu03g00523 785 SMART AAA_5 418 568 IPR003593 -
Adu03g00523 785 Gene3D - 695 779 IPR036388 -
Adu03g00523 785 SMART mcm 180 690 IPR031327 GO:0003677|GO:0005524|GO:0032508
Adu03g00523 785 Pfam MCM P-loop domain 365 586 IPR001208 GO:0003677|GO:0005524|GO:0032508
Adu03g00523 785 Pfam MCM N-terminal domain 78 170 IPR027925 -
Adu03g00523 785 Gene3D - 194 316 IPR012340 -
Adu03g00523 785 Pfam MCM OB domain 194 306 IPR033762 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00523 Adu-Chr3 4867450 4872445 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00523 1 784 Core DNA Replication Machinery Family AT2G16440 69.836 0.0 1178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00523 K02212 - gmx:100782586 1332.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00523 03 4867450 4872445 Adu03g00523 03 4867450 4872445 ECH