Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00517 ATGAGAACCTCATTGTGTTGTAGCATTATTCTGTTAAGTTTCGTCTTCATTTGGCTGAATAATGTAACAGTAACAGTGTTAGGCTCTTCCTTCAGCGACCTCGACACGTTGTTGAAGCTCAAGGAAGCCATGAAAGGATCAAAAGCCAAACCCGACGCGCTTCAAGATTGGAAATTCTCAACCTCTATCTCCGCTCACTGTTCATTCTCCGGCGTCACCTGCGACCGCCAGAACCTCCGCGTCGTGGCCCTTAACGTCTCCTTTGTTCCCCTTTTCGGCAGCATTCCGCCGGAGATAGGCCTCTTGGACAAGCTCGAGAGCCTTACCCTCTCATCGGACAATCTCACCAAGGAGCTTCCCATGGAGCTCGCCAATCTCACCTCCCTCAGGCTCCTCAACATCTCGCACAACCTTTTCTCTGGTCGCTTCCCCGGCGATATCACCGTGGCCATGACAGAACTCGAAACGCTGGACATCTACGACAACAGCTTCAGCGGAACCTTACCAGAGGAGTTCGTGAGACTGGAGAAGCTCCGGTGCCTCAACCTCTCTGGAAACTATTTCTCCGGCGAGATTCCTGAGAGTTACTCTGAGTTCGAAAGCTTGGAGGTTCTGAACCTCGCCACAAACAGCTTAACCGGCAAGATTCCAAGAAGCTTGGTGAAATTGAAGAAGCTGAAAAGACTATCCCTCGGGTATGATAATTCCTACTCAGATGTAGTACCTACAGAATTCGGTTCGTTCGAGTCGTTGCAACTGCTTGATTTGTCCAGCTGTAACTTGAGCGGTGAGATTCCTCCCACGCTCGGCGCGTTAACTCACTTGCACACTCTCTTCCTTCAAATGAACAACCTTACCGGAACCATTCCTTCACAACTCTCCACTATGATAAGCCTCAAGTCGTTGGATCTCTCCTACAACGAGTTAACGGGCGAGTTTCCGTTGACATTCTCTAAGCTCACCAATCTCACGCTAATCAATTTCTTCCATAACAAACTCCGAGGCAACATCCCTTCCTTCGTTGGGGACCTCCCGAACCTGGAGACCTTTCAGGTTTGGGGTAACAACTTCTCCAACGTGCTTCCACCCAACCTTGGCCAAAACGCCAGATTCTTATACTTCGACGTCACTAATAACCACTTCACTGGAGAGCTCCCTAGGGACCTGTGCAAATCCGGCAGGTTGAAAACGTTCTTGGCCACCGGTAACTTCTTCTACGGCACCATTCCTGAAGGAATAGGAGGTTGCGTTTCGTTGGAGAAGATAAGAATTAGTGATAACTTCCTCCAAGGCCAGGTTCCTCCTGGGATCTTTAAATTGCCATCTGTCCAGATCATCGAGATGGCGAATAACCGTTTTAACGGAAATATTCCTTCTGATATTTCCGGGGATTCCCTCAGCATCCTAACCCTCTCCACTAACAACTTCGCCGGCAGGATCCCGCCGGAGCTCAAGAATCTCCAGAAACTGCAGACGCTTGCGCTCGACGCGAACCAGTTCGTTGGAGAGATTCCAGGGGAGGTGTTTGACTTGCCGGCGTTGATCAAGGTCAACTTGAGCGGCAACAACCTCACCGGTGAGATTTCGGAGTCGGTGATTCACTGTGGTTCTCTGACGGCGGTTGATTTTAGCCGGAACATGCTCACCGGAGAAATTCCCAAGGGGATAAAAAGCCTCACAGTTCTAAGCATCTTGAACCTCTCGCGCAACCACATCACCGGAACTGTCCCCGACGAGATTCGCTTCATGACGAGCCTCAACACGCTGGATCTCTCCAACAACAACTTCATTGGAAGAGTCCCCACGGGTGGCCAGTTCGTGGCCTTCAACGACAAGTCGTTTGCAGGGAACCCTAACCTCTGCTCTCCGCACCAGCCGTATTGTCCTTCCTCCGTCAACACTGCCTCTGGAAAAAGCCACAATCCTCTGAGTTCAAAATCAACTAAGGTAGTTATAATCGTGATCGGGATCTCCACGGCAGTGCTCCTGGCTATGGTGACGGTATACATTATGAGGAAGAGGAAGCACCAGAAAGAAATGTCGTGGAAGCTGACGGCGTTCCAGTCAACGCTGAAAATGAAGGCAGAGGAGGTGGTGGAATGCTTGAAGGAAGAGAACATCATTGGAAAAGGAGGAGCAGGAATCGTGTACCGCGGGACAACACCGAAGGGAACGGAGGTAGCAATCAAGAGACTTGTGGGGCAAGGAAGTGGAAGAAACGATTACGGTTTCAAGGCGGAGATAGAGACGTTAGGGAAGATAAGGCACAGGAACATAATGAGGCTCTTGGGGTACGTGTCAAATAAGGACACGAACCTGTTGCTGTATGAGTACATGCCGAATGGAAGCTTGGGAGAGTGGCTGCATGGTGCGAAGGGAGGGCACCTCACGTGGGAAATGAGATACCGCATTGCGGTGGAGGCTGCCAAGGGGCTCTGCTACTTGCACCATGATTGCTCGCCCTTGATCATTCACAGGGATGTTAAGTCCAATAACATCTTGCTTGATGAGAACTTTGAGGCACACGTTGCTGATTTTGGGCTCGCCAAGTTCTTGCAGGACCCTGGAGCGTCTCAGTCCATGTCCTCCATTGCTGGCTCCTACGGCTACATTGCTCCAGAGTACGCTTACACGCTGAAAGTGGACGAGAAGAGCGATGTATACAGCTTTGGAGTAGTGCTGTTGGAGCTGATCGTAGGAAGGAAGCCAGTGGGTGAGTTTGGAGATGGTGTTGACATCGTTGGATGGGTCAACAAGACCATGTCGGAGCTGTCTCAGCCGTCTGATGCGGCTTCCGTGTTGGCAGTGGTGGACCCCAGGCTCAATGGGTATCCATTGGGCAGCGTCATCCACATGTTCAACATAGCTATGATGTGTGTTAGAGAAATTGGCCATGCTAGGCCTACCATGAGGGAAGTTGTTTATATGCTCACTAATCCACCTCAATCTACCACCCATCATAACCTAATTAATCTCTAG 2979 0.5049 MRTSLCCSIILLSFVFIWLNNVTVTVLGSSFSDLDTLLKLKEAMKGSKAKPDALQDWKFSTSISAHCSFSGVTCDRQNLRVVALNVSFVPLFGSIPPEIGLLDKLESLTLSSDNLTKELPMELANLTSLRLLNISHNLFSGRFPGDITVAMTELETLDIYDNSFSGTLPEEFVRLEKLRCLNLSGNYFSGEIPESYSEFESLEVLNLATNSLTGKIPRSLVKLKKLKRLSLGYDNSYSDVVPTEFGSFESLQLLDLSSCNLSGEIPPTLGALTHLHTLFLQMNNLTGTIPSQLSTMISLKSLDLSYNELTGEFPLTFSKLTNLTLINFFHNKLRGNIPSFVGDLPNLETFQVWGNNFSNVLPPNLGQNARFLYFDVTNNHFTGELPRDLCKSGRLKTFLATGNFFYGTIPEGIGGCVSLEKIRISDNFLQGQVPPGIFKLPSVQIIEMANNRFNGNIPSDISGDSLSILTLSTNNFAGRIPPELKNLQKLQTLALDANQFVGEIPGEVFDLPALIKVNLSGNNLTGEISESVIHCGSLTAVDFSRNMLTGEIPKGIKSLTVLSILNLSRNHITGTVPDEIRFMTSLNTLDLSNNNFIGRVPTGGQFVAFNDKSFAGNPNLCSPHQPYCPSSVNTASGKSHNPLSSKSTKVVIIVIGISTAVLLAMVTVYIMRKRKHQKEMSWKLTAFQSTLKMKAEEVVECLKEENIIGKGGAGIVYRGTTPKGTEVAIKRLVGQGSGRNDYGFKAEIETLGKIRHRNIMRLLGYVSNKDTNLLLYEYMPNGSLGEWLHGAKGGHLTWEMRYRIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDENFEAHVADFGLAKFLQDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIVGRKPVGEFGDGVDIVGWVNKTMSELSQPSDAASVLAVVDPRLNGYPLGSVIHMFNIAMMCVREIGHARPTMREVVYMLTNPPQSTTHHNLINL 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00517 992 SUPERFAMILY RNI-like 314 598 - -
Adu03g00517 992 Gene3D Ribonuclease Inhibitor 150 258 IPR032675 -
Adu03g00517 992 Gene3D Transferase(Phosphotransferase) domain 1 779 989 - -
Adu03g00517 992 PANTHER UNNAMED PRODUCT 8 984 - -
Adu03g00517 992 Pfam Protein tyrosine and serine/threonine kinase 703 932 IPR001245 GO:0004672|GO:0006468
Adu03g00517 992 SUPERFAMILY Protein kinase-like (PK-like) 689 977 IPR011009 -
Adu03g00517 992 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 8 984 - -
Adu03g00517 992 Gene3D Ribonuclease Inhibitor 259 319 IPR032675 -
Adu03g00517 992 Gene3D Ribonuclease Inhibitor 32 149 IPR032675 -
Adu03g00517 992 ProSitePatterns Serine/Threonine protein kinases active-site signature. 823 835 IPR008271 GO:0004672|GO:0006468
Adu03g00517 992 PRINTS Leucine-rich repeat signature 299 312 - -
Adu03g00517 992 PRINTS Leucine-rich repeat signature 583 596 - -
Adu03g00517 992 ProSiteProfiles Protein kinase domain profile. 702 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g00517 992 SMART serkin_6 702 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g00517 992 Gene3D Phosphorylase Kinase; domain 1 665 778 - -
Adu03g00517 992 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Adu03g00517 992 Pfam Leucine rich repeat 201 261 IPR001611 GO:0005515
Adu03g00517 992 Pfam Leucine rich repeat 274 333 IPR001611 GO:0005515
Adu03g00517 992 SMART LRR_typ_2 583 606 IPR003591 -
Adu03g00517 992 SMART LRR_typ_2 199 223 IPR003591 -
Adu03g00517 992 SMART LRR_typ_2 559 582 IPR003591 -
Adu03g00517 992 SMART LRR_typ_2 248 272 IPR003591 -
Adu03g00517 992 SMART LRR_typ_2 487 511 IPR003591 -
Adu03g00517 992 SMART LRR_typ_2 344 368 IPR003591 -
Adu03g00517 992 SMART LRR_typ_2 151 175 IPR003591 -
Adu03g00517 992 SMART LRR_typ_2 296 319 IPR003591 -
Adu03g00517 992 SUPERFAMILY L domain-like 65 384 - -
Adu03g00517 992 Gene3D Ribonuclease Inhibitor 320 636 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00517 Adu-Chr3 4834287 4838780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00517 30 990 Receptor kinase-like Gene Family AT1G75820 60.499 0.0 1173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu03g00517 PK_Tyr_Ser-Thr 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00517 K00924 - gmx:732661 1436.78