Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00508 ATGGCTGAGAACTTTGATTACCTTGCTGATGTGAATGCAAAAACTCTTCATTGGAGTTTCAAGGTCTTTGTTGTTAGGGCATGGGATGTTCCAAGTAGATTTAATGACAAAGAGGTTATGAGCATGGAGCTGGGTCATAGGTTGCAAACTTCGATACCAAAACCATTGGTTAAGAAGTGGAAGGATGTCATAGTGGAGTTTCAGATGTACACGATGAAAAATTTCGTTGTTTTGGATAACACTACATACCCCAAGGTAACTCCGGATAAATATATATTAGTTTTCTCACACCGGACCAGGGTTCATCACGTTGAACATCCAAGCTTTCCACTTGATGCCTTTCGCTTGAAGTCATTTAAGGAATTGCTTAATGCTGATAAGTTGGACGACTCTGAACTTATTGATATAATTGGTGAGGTTGTAGGCAAAGAGGATCCCAGAGATTTGGTAACCAGCAAAGGGGTGGAGACTAAACGGTTGGCCATAATCCTACAAGATTTAGACAACAATAAGATTAGCTGTGCTCTGTTTGGTAAAATGGTAGACGAGCTTTTACCTCATCTTCACGATGGAAGGGTTGAACCTCTCATTGTAGTGCTCCAATATTTTAAACCTAATAGATGGAATGGTAAAACATCTGTCCAGAGTCATTTCTATGTTTCCAAGCTGCACATCAATGATGGTTTAAAAGAAGTTGTTGGATTCCGAAATAGATTGCTTAGCGGAGTGGCTGCAAGTTCCTCTAGGATTAGCCAAGTTTCATCTCAGGGGGGATGGTCTGGAGCTGATGAGATAAACCAAGGTGCTGTTTTGGTGAAGACTATTGAGCAAGCACTTAATGTTAAAGAGGAATGTCCGATATGGATATGTGCAAGCATTGTATCTTTAAATGTTGGCAAGGATGATTGGTTTTACAAATCATGCAGAAAATGTCCAAAAAAAGTTGATACTCCTATTGGAAATAGATATGAATGTACCAAGTGTGGACACACTCATGGTTGTGCTTCTTTGAGGTTCAAGGTACAGGTCATGGTCCACGATGGAACTGGGAGTATCACCCTCTTGCTTTGGGATAAGGAAACAACTCAACTTTGTGGAAAGAAAGCTGAACAAGTAATGGAGGATGATGATGGAATGCAGGAGTGTATATCAACCCTCAAATGCAAAACCCCTGGTAAGAGAACTACCAGCCTCTTAAATCCAGCCAATCAAGAAATGAATGAGAATGAGGATGAAGGACAACTGTCAACTAATAGAGGTGGCAGGAAGGGTGTAAAGAAGATCAAGGCAAATATGGCTCAAGTGCAGCATTGA 1314 0.4064 MAENFDYLADVNAKTLHWSFKVFVVRAWDVPSRFNDKEVMSMELGHRLQTSIPKPLVKKWKDVIVEFQMYTMKNFVVLDNTTYPKVTPDKYILVFSHRTRVHHVEHPSFPLDAFRLKSFKELLNADKLDDSELIDIIGEVVGKEDPRDLVTSKGVETKRLAIILQDLDNNKISCALFGKMVDELLPHLHDGRVEPLIVVLQYFKPNRWNGKTSVQSHFYVSKLHINDGLKEVVGFRNRLLSGVAASSSRISQVSSQGGWSGADEINQGAVLVKTIEQALNVKEECPIWICASIVSLNVGKDDWFYKSCRKCPKKVDTPIGNRYECTKCGHTHGCASLRFKVQVMVHDGTGSITLLLWDKETTQLCGKKAEQVMEDDDGMQECISTLKCKTPGKRTTSLLNPANQEMNENEDEGQLSTNRGGRKGVKKIKANMAQVQH 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00508 437 Pfam Replication factor-A C terminal domain 298 377 IPR013955 -
Adu03g00508 437 CDD RPA1_DBD_C 272 390 IPR013955 -
Adu03g00508 437 MobiDBLite consensus disorder prediction 403 425 - -
Adu03g00508 437 Pfam Domain of unknown function DUF223 43 119 IPR003871 -
Adu03g00508 437 SUPERFAMILY Nucleic acid-binding proteins 4 108 IPR012340 -
Adu03g00508 437 PANTHER REPLICATION FACTOR A 1, RFA1 25 374 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu03g00508 437 PANTHER BNAC07G49340D PROTEIN 25 374 - -
Adu03g00508 437 Gene3D - 108 247 IPR012340 -
Adu03g00508 437 SUPERFAMILY Nucleic acid-binding proteins 273 389 IPR012340 -
Adu03g00508 437 Gene3D - 7 106 IPR012340 -
Adu03g00508 437 SUPERFAMILY Nucleic acid-binding proteins 116 239 IPR012340 -
Adu03g00508 437 CDD RPA1_DBD_A_like 21 101 - -
Adu03g00508 437 CDD RPA1_DBD_B_like 135 239 - -
Adu03g00508 437 Gene3D - 254 410 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00508 Adu-Chr3 4711705 4714371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00508 8 372 Core DNA Replication Machinery Family AT2G06510 22.000 6.27e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00508 - - adu:107477039 759.214