Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00501 ATGGCTCCAAAGAAGGATAAGGCTCCTCCACCATCTTCTAAACCCGCCAAATCTGGTGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACCAGGTGCTGTTTGATCAGGGTACTTATGACAAGCTCCTCTCTGAAGCTCCCAAATTCAAGCTCATCACTCCTTCCATTCTCTCTGATCGTTTGAGGATTAATGGATCACTTGCAAGGAGGGCTATAAGAGAGTTGATGGCTAGAGGTTCAGTTAGACTGGTTTCCGCTCACGCGAGTCAGCAGATTTACACTAGAGCAACAAACACCTAG 327 0.4709 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNQVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIRELMARGSVRLVSAHASQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00501 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Adu03g00501 108 MobiDBLite consensus disorder prediction 1 38 - -
Adu03g00501 108 Gene3D - 21 108 - -
Adu03g00501 108 PANTHER BNAA04G12260D PROTEIN 2 108 - -
Adu03g00501 108 PANTHER 40S RIBOSOMAL PROTEIN S25 2 108 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00501 Adu-Chr3 4563503 4565322 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00501 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 91.589 4.05e-55 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00501 K02975 - gmx:100786842 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00501 03 4563503 4565322 Adu03g00501 03 4563503 4565322 ECH