Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00498 ATGAATATGATTATGGAAAAGAGAAGCTTTTCTGAGTTCATGTCAGAGCTAGTAGCTCTGGTTGATGAGGTTGCTTCATTTGCTATGAATCCTGAAGTTGAGATAGATGCTTTTACCGAGTTTGCCATGTTGGTTGAGAAATTGGCACCAATTTTCAGTGATTTGAGTGACAAAATCACAGTTATAGAAAACAAGCCATCCATCAGAAAATCTTTGGAATCGATTGAAACTTCGCTTAGCCGTGCTAAAGCTTTGAAAAAAAGTTCTAGCTTGAAAGACCCTAGCAAACATATTGAGGACACAACACATGATATTGGTCGATCACTAGGCCTATTGCTCCTTGAATTGTCCACAGATTTTAGAGAAAAGGTTGGTACATTGCAAAAACAGTTTATGAATGCAAGATTTGGTGGGAACATGAGCCTATCTTCAAGTCCAGTATCATTAGAGTTTGCAAATGATGTGTATGGTGGAGGGGAAATAGAAGAGGAAATAGTCAATGTTACTATAGAAGATGTTGTATTGCAACTTAAGAATGGTAATGATGAAGAATTTGCAGTTGCTCTTTGGAGACTAAAGGAGTTCATCAGGGATGAGAAGCTGGAAAGTTGTTTGGTTAATGAGGAAGCTGTTGTTGCTGTTCTGTTAAATAGACTGCGTTCGTGTAAGGCAGACAATAGACTTAACATCATTCAATTGTTACGAAATATGGCTTCGGGAAATGATGACACAAAGGAGAAGATGGCAGAAACCGAGTTTTTATCAGCAGTGGTGAAGTCTCTAACAAGAGATGCAGAAGAGAGGAGGGAAGCAGTGGGACTGCTGCTAGAACTCTCTGATCTTCCTGCAGTTCGACGGCAAATTGGAAGAATTCAGGGGTGCATTGTAATGTTAGTCTCTATCCTTAATGGAAGCGACCCCATTGCTTCGCAAGGTGCAGCCAAGTTGTTGGATATGTTGTCCAGTAATACTCAAAATGCACTTCACATGGCTGAGGCTGGTTACTTTAAGCCTCTAGTGCAGTATTTGAAGAAAGGCTCTGACATGAACAAGATCCTTATGGCAACAGCACTTTCTAGGTTGGTGCTAACAGATCACAGCAAACTTTCCCTCGGCGAAGATGGGGCAATCGAGCCCCTTGTCAACATGTTTCACACTGGCAAACTTGAGTCCAAGTTGTCTGCTCTAAATGCCCTGCAAAATCTTTCCAGTGTGACAGAAAATGTGCAACTTCTAATCAGGTCTGGGATTGCAGGATCATTGCTGCAGCTTCTTTTTTCAGTAACATCTGTGCTAATGACTCTTAGGGAGCCAGCATCTGCTATTCTTGCAAGAATTGCTCAGTCGGAATCTATTATTGTTAATCAGGATGTTGCTCAGCAGATGCTCTCACTCTTGAACCTTTCCAGCCCAATAATTCAAGGCCATCTCTTGGAAGCTCTAAGTAGCATCGCTGCGCATCCTCGCGCATCTAAAGTGAGAAGAAAAATGAAAGAAAAAGGAGCACTTCAGCTAATTTTGCCTTTTCTGAAGGAAACTAACACTACAACAAGAAGCAAGGCCCTTAATTTGCTCTATACTCTTTCCAAAGATCTTACAGATGAGTTGAGTGAACATCTTGATGAAGCTCATCTTATTCACATTGTTAATATTGTCTCATCATCATCATCAGATAGTGAAAAGGCTGCAGCTCTTGGCATACTGAGTAATCTTCCAGTTAGTGATAAAAAGGTGACTGATATTCTGAAGAAAGCAAATTTGTTGTCTATTTTAATATCCAATATGGCTTCGAGCACTGGAAGTAACTCGCCTGTGACAAGAACCTTAGCTGAAATTGTTGCTTGTGTTATAGTTAGGTTCACAAATCCTTCTGACAAGAAACTGCAGCTCTATTCAGCTGAACAAGGGGTGATTCCTTTGCTTGTGAAACTTCTCTCAAGTGGTTCATCAATTGCAAAATTCAGAGCTGCGACCGCTTTGGCTCAGCTATCACAAAATTCTCTGTCCCTCAGGAGGAGTAGGAAGTCAAAGTGGTTTTGTGTAAATCCATCAGTAGAAGCATATTGTGAAGTGCATGATGGTTATTGCTATGTGAACTCCACATTTTGTCTGGTCAAGGCTGGTGCTGTTCCGGCACTTATCAAAATACTTGAAGATAAGGAGTGGGAAGCAGTTGAGGCTGCTTTGATTGCCCTTTCAACTCTTTTGCAAGACGAAATCTGTGAAGGCGGCATCAATTGGATAGCCAAGAATTCAGGTGTGCAAGCTATTATCAAAATTTTAGAAGCAGGTGATGTGAAGGTTCAAGAAAAAGCACTATGGATGTTGGACAGAATATTCAGGATTGAAGAGCACAGAGTAAAATATGGAGAATCAGCTCAGGTTTTTCTTATTGATTTGGCGCAGACGTGTGATTCTCGATTGAAGTCAACTGTTGCAAAAGTTTTGGCAGAGTTGGAGCTCCTGCAAGTTCAATCAAGTTATTTCTGA 2490 0.4084 MNMIMEKRSFSEFMSELVALVDEVASFAMNPEVEIDAFTEFAMLVEKLAPIFSDLSDKITVIENKPSIRKSLESIETSLSRAKALKKSSSLKDPSKHIEDTTHDIGRSLGLLLLELSTDFREKVGTLQKQFMNARFGGNMSLSSSPVSLEFANDVYGGGEIEEEIVNVTIEDVVLQLKNGNDEEFAVALWRLKEFIRDEKLESCLVNEEAVVAVLLNRLRSCKADNRLNIIQLLRNMASGNDDTKEKMAETEFLSAVVKSLTRDAEERREAVGLLLELSDLPAVRRQIGRIQGCIVMLVSILNGSDPIASQGAAKLLDMLSSNTQNALHMAEAGYFKPLVQYLKKGSDMNKILMATALSRLVLTDHSKLSLGEDGAIEPLVNMFHTGKLESKLSALNALQNLSSVTENVQLLIRSGIAGSLLQLLFSVTSVLMTLREPASAILARIAQSESIIVNQDVAQQMLSLLNLSSPIIQGHLLEALSSIAAHPRASKVRRKMKEKGALQLILPFLKETNTTTRSKALNLLYTLSKDLTDELSEHLDEAHLIHIVNIVSSSSSDSEKAAALGILSNLPVSDKKVTDILKKANLLSILISNMASSTGSNSPVTRTLAEIVACVIVRFTNPSDKKLQLYSAEQGVIPLLVKLLSSGSSIAKFRAATALAQLSQNSLSLRRSRKSKWFCVNPSVEAYCEVHDGYCYVNSTFCLVKAGAVPALIKILEDKEWEAVEAALIALSTLLQDEICEGGINWIAKNSGVQAIIKILEAGDVKVQEKALWMLDRIFRIEEHRVKYGESAQVFLIDLAQTCDSRLKSTVAKVLAELELLQVQSSYF 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00498 829 SUPERFAMILY ARM repeat 266 666 IPR016024 -
Adu03g00498 829 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 375 417 IPR000225 GO:0005515
Adu03g00498 829 Gene3D - 265 677 IPR011989 -
Adu03g00498 829 Gene3D - 160 264 IPR011989 -
Adu03g00498 829 Gene3D - 692 826 IPR011989 -
Adu03g00498 829 SUPERFAMILY ARM repeat 629 819 IPR016024 -
Adu03g00498 829 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 5 829 - -
Adu03g00498 829 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN-LIKE 5 829 - -
Adu03g00498 829 SMART arm_5 697 737 IPR000225 GO:0005515
Adu03g00498 829 SMART arm_5 490 530 IPR000225 GO:0005515
Adu03g00498 829 SMART arm_5 323 363 IPR000225 GO:0005515
Adu03g00498 829 SMART arm_5 364 404 IPR000225 GO:0005515
Adu03g00498 829 SMART arm_5 241 280 IPR000225 GO:0005515
Adu03g00498 829 SMART arm_5 625 665 IPR000225 GO:0005515
Adu03g00498 829 SMART arm_5 741 781 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00498 Adu-Chr3 4538938 4542196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00498 180 829 U-box Gene Family AT1G76390 28.777 2.48e-50 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00498 K08332 - gmx:100791453 1098.57