Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00486 ATGGCTTCAACCACTCTTAGCAAACAAAAGAAGCCTTCTTCTGAGTCCTCATCAAGATGGACAGCAAAAGAAAATAAGCTCTTTGAGAAGGCACTTGCAGAATATGATAAAGACACTGCAGATAGGTGGCAGAATGTGGCAAAAGCAGTTGGTGGAAAATCTGTTGATGAAGTTAAGAGACATTATGAAATTCTCTTAGAAGATCTCAGACACATTGAGTCCGGCCATGTTCCAATTCCTAACTACAAGTCCACACCTTCAACCACCACCAATCTTGATGAAGAACAGAGGTATTATTATTAG 303 0.3993 MASTTLSKQKKPSSESSSRWTAKENKLFEKALAEYDKDTADRWQNVAKAVGGKSVDEVKRHYEILLEDLRHIESGHVPIPNYKSTPSTTTNLDEEQRYYY 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00486 100 CDD SANT 19 66 IPR001005 -
Adu03g00486 100 MobiDBLite consensus disorder prediction 75 100 - -
Adu03g00486 100 Gene3D - 11 79 - -
Adu03g00486 100 MobiDBLite consensus disorder prediction 1 21 - -
Adu03g00486 100 PANTHER PROTEIN RADIALIS-LIKE 3 1 85 - -
Adu03g00486 100 ProSiteProfiles SANT domain profile. 15 70 IPR017884 -
Adu03g00486 100 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Adu03g00486 100 SMART sant 16 68 IPR001005 -
Adu03g00486 100 MobiDBLite consensus disorder prediction 80 100 - -
Adu03g00486 100 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 85 IPR044636 GO:0003700
Adu03g00486 100 Pfam Myb-like DNA-binding domain 18 62 IPR001005 -
Adu03g00486 100 ProSiteProfiles Myb-like domain profile. 12 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00486 Adu-Chr3 4425352 4427463 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu03g00486 Myb_DNA-binding 9.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00486 - - ahf:112788989 189.504