Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00481 ATGGCTGCCGCAGATGTTGAGTTCCGGTGCTTCGTTGGTGGGCTTGCATGGGCCACCGATAACGATGCTCTAGAGAAGGCCTTCTCTGCCTACGGAGAAATCGTTGAATCGAAGGTTATCAACGATCGCGAAACTGGAAGATCCAGAGGTTTTGGATTTGTGACCTTTGCTAATGAGCAATCCATGAGGGATGCGATTGATGGCATGAACGGCTCCAACCTTGACGGCCGTAACATCACTGTCAACGAGGCTCAGTCCCGTGGAGGTGGCGGAGGTGGTGGAGGTGGCTTCAGAAGCGGAGGCGGCGGTGGATATGGTGGTGGCGGATTTAGCCGCGGCGGCGGTGGTGGTGGATACGGAGGCGGGGGCCGTCGTGAAGGTGGATACAACAGAAATGGTGGTGGCGGCGGTGGCTACGGATGGAGGAACTGA 432 0.5718 MAAADVEFRCFVGGLAWATDNDALEKAFSAYGEIVESKVINDRETGRSRGFGFVTFANEQSMRDAIDGMNGSNLDGRNITVNEAQSRGGGGGGGGGFRSGGGGGYGGGGFSRGGGGGGYGGGGRREGGYNRNGGGGGGYGWRN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00481 143 PANTHER GEO13361P1-RELATED 1 139 - -
Adu03g00481 143 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
Adu03g00481 143 Gene3D - 2 106 IPR012677 -
Adu03g00481 143 PANTHER RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED 1 139 - -
Adu03g00481 143 MobiDBLite consensus disorder prediction 121 143 - -
Adu03g00481 143 MobiDBLite consensus disorder prediction 82 106 - -
Adu03g00481 143 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Adu03g00481 143 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Adu03g00481 143 SMART rrm1_1 9 82 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00481 Adu-Chr3 4386818 4388229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00481 10 88 Eukaryotic Initiation Factors Gene Family AT4G34110 37.975 4.20e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00481 - K13195 ccaj:109800369 160.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00481 03 4386818 4388229 Adu03g00481 03 4386818 4388229 ECH