Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00480 ATGGTGGATCAGCGAAACATAGTATCGTTTATTCCCTTGTTCTTGTTGTTGTGGTTGAAGCTGTTTCATTTTGAGCTCACATTGGAGCAGCAGGTTCAGCAACTGAGTTCACCAGCTGAAAGAGCAGCACTGCTTCAACTTCGGTCCTCGCTCGGATTGAGGTCCAAGGAATGGCCAAGAAAGGCTGATCCTTGCTCAAACTGGATTGGTGTAAGGTGCCAGAATGGTAGAGTTGTTGGGATCAACATCTCTGGCTTTAGGAGAACCAGAATTGGTCGGCGAAATCCACAGTTTTCTGTAGAAGCCTTGGCCAATTTGACCCTCTTGCAGTCCTTCAATGCCTCCAATTTCCGGCTTCCCGGTCCTATCCCTGATTGGTTTGGCCAGAAGCTCCATTCACTTCGTGTGCTTGATCTTCGGTCTTGCTTCATTACCGGTGTTATTCCCCCTGGTGTTGGGAATTTAACCAACCTGACTAGCCTCTATCTGTCTGATAACAATCTAACTGGTGTGCTTCCTAATAGTCTTGGTCAACTCTCAGTACTTTCAGTTCTTGATCTCTCCAAGAATTTTATTAATGGATCCTTGCCAACATGGTTTGCATCTCTTGGGAATCTTTCTTCCCTTGACATCTCGGCTAATCATCTATCCGGCTCAATTCCCCCTGGCATTGGGACACTATCTAAGTTGCAATTCTTAGTGCTGAGACAGAACAATTTCACTGGTGCTTTACCTGTAGAGCTATGGTCTCTGCCACAACTGAGCTTCCTCGATGTCTCCAGCAATAACTTCACTGGCCAGCTTCCAAATTCTAGTTCCATTGCTAATGCTACTGTTGGGCAGCTCAATATTTCCCATAACATGTTTTATGGAGGCCTTACTACTATCCTTAGAAGGTTTAGTTCTGTTGATCTGTCAGGCAATTATTTTGAAGGCAATGTTCTGGACTTCATGGTTAATGCATCTATAGGTAGGAATTGCCTCCGAAATGTGACAGGGCAGAGGACACTAGCAGAATGTGCATCATTTTATGCTGCAAGGGGCCTTGCTTTTGATAATTTTGGACGTCCGAATTCAACAGGAGATTCTGCAGGAAAGGCGTCCGGAATGAGCAATAAAACTAAAATTTTAATTGCAGCGATCTCAGGTGGGGTTGGTTTATTTGTGCTGCTGCTGTTACTCATTCTGCTTCTGCTATGCATTCGTAAGAGGGGTAATTCAAGTCAAAGGGGCAACGGCGTGGGTCCTGCTCCAGCTGGAGGCAGTCCTCCACATCCCGGTGCTGGTTCATCAATAAAGTTCTCAAGTGTAGGAGATTCATTTAAAAGGATTGACATCCGATCAACTCAGAAGGATGCTTACTTGTCGGAATTGGATTTTTTCAATAAGGTTTCTCATCCGAGATTTGTTCCCTTGTTGGGTCACTGCTTAGAGACTGAGAATGAAAAGTTTCTCATTTATAAAGCTATGCCAAATGGGGACTTGTCGAGTTGCTTGCACTACAAAAAGACGGTGTCTGAAGATGATAAATTGAAGTCACTGGACTGGATAACAAGGTTAAAAATTGCTACTGGAGCAGCAGAGGCCCTGGCTTATCTACATCATGAATGTAATCCACCAATTGTTCATAGAGATGTCCAAGCAAGCAGTATACTTTTAGAAGATAAATACGAAGTTCGGTTAGGGAGTCTAAGTGAAGCATGCCCTCAAGATGGGGATACTCAACAAAGCAAAATTACCCGGTTGCTACGGTTGCCCCAGTCTTCTGAACAAGGCACATCTGGTTCGTCAACATCGGTTTGTGCCTATGACGTGTATTGTTTTGGGAAAGTTTTACTTGAGCTGGTGACTGGCAAGCTGGGAATCAGTGCAGCCAGTGATGCCGAAGCGAAGGAATGGCTGGAGCAGATTCTACCTTGCATTACTATTTATGACAAGGAGCGTATAACAAAAATAGTGGATCCATCTCTTATCGTTGATGACGAGGATTTATTAGAGGAAGTGTGGGCAGTGGCCATTGTTGCCAGGACTTGCCTAAATCCTAAACCTTCAAGAAGACCCCAAATGAGACATGTTCTGAGGGCTTTAGAAAACCCTTTTAAAGTTGTAAGGGAAGAAAATTCCAGTTCTGCTCGGCTTAGATCAACTTCATCGAGAGGCTCATGGAACGCTACATTGTTTGGTAGTTGGCGTCAGAGTTCATCCGATGTAGCAGTAATTCCAGCAGCCTCTAGTACAAGAATAGAAAGAGAGAGTAGTTTAAAGCATTCGGGAACTACCGGCTCGGAGATTAGCCTCCAAAATGTTGGTGGTGATATGTCATCCATATCTCCAGAACCATCTGGAGTTGAAGGCCTGAAGTCTTGA 2367 0.444 MVDQRNIVSFIPLFLLLWLKLFHFELTLEQQVQQLSSPAERAALLQLRSSLGLRSKEWPRKADPCSNWIGVRCQNGRVVGINISGFRRTRIGRRNPQFSVEALANLTLLQSFNASNFRLPGPIPDWFGQKLHSLRVLDLRSCFITGVIPPGVGNLTNLTSLYLSDNNLTGVLPNSLGQLSVLSVLDLSKNFINGSLPTWFASLGNLSSLDISANHLSGSIPPGIGTLSKLQFLVLRQNNFTGALPVELWSLPQLSFLDVSSNNFTGQLPNSSSIANATVGQLNISHNMFYGGLTTILRRFSSVDLSGNYFEGNVLDFMVNASIGRNCLRNVTGQRTLAECASFYAARGLAFDNFGRPNSTGDSAGKASGMSNKTKILIAAISGGVGLFVLLLLLILLLLCIRKRGNSSQRGNGVGPAPAGGSPPHPGAGSSIKFSSVGDSFKRIDIRSTQKDAYLSELDFFNKVSHPRFVPLLGHCLETENEKFLIYKAMPNGDLSSCLHYKKTVSEDDKLKSLDWITRLKIATGAAEALAYLHHECNPPIVHRDVQASSILLEDKYEVRLGSLSEACPQDGDTQQSKITRLLRLPQSSEQGTSGSSTSVCAYDVYCFGKVLLELVTGKLGISAASDAEAKEWLEQILPCITIYDKERITKIVDPSLIVDDEDLLEEVWAVAIVARTCLNPKPSRRPQMRHVLRALENPFKVVREENSSSARLRSTSSRGSWNATLFGSWRQSSSDVAVIPAASSTRIERESSLKHSGTTGSEISLQNVGGDMSSISPEPSGVEGLKS 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00480 788 PANTHER RECEPTOR-LIKE PROTEIN 55 12 441 - -
Adu03g00480 788 PANTHER RECEPTOR-LIKE PROTEIN 55 442 744 - -
Adu03g00480 788 SMART LRR_typ_2 155 178 IPR003591 -
Adu03g00480 788 SMART LRR_typ_2 179 202 IPR003591 -
Adu03g00480 788 SMART LRR_typ_2 203 227 IPR003591 -
Adu03g00480 788 SMART LRR_typ_2 131 154 IPR003591 -
Adu03g00480 788 SMART LRR_typ_2 251 275 IPR003591 -
Adu03g00480 788 Pfam Protein tyrosine and serine/threonine kinase 447 694 IPR001245 GO:0004672|GO:0006468
Adu03g00480 788 Gene3D Ribonuclease Inhibitor 37 189 IPR032675 -
Adu03g00480 788 Gene3D Ribonuclease Inhibitor 190 331 IPR032675 -
Adu03g00480 788 Pfam Leucine rich repeat 156 216 IPR001611 GO:0005515
Adu03g00480 788 Gene3D Transferase(Phosphotransferase) domain 1 494 717 - -
Adu03g00480 788 SUPERFAMILY L domain-like 57 311 - -
Adu03g00480 788 Gene3D Phosphorylase Kinase; domain 1 432 493 - -
Adu03g00480 788 PANTHER BNAA07G03560D PROTEIN 442 744 - -
Adu03g00480 788 PANTHER BNAA07G03560D PROTEIN 12 441 - -
Adu03g00480 788 MobiDBLite consensus disorder prediction 749 788 - -
Adu03g00480 788 Pfam Leucine Rich Repeat 133 155 IPR001611 GO:0005515
Adu03g00480 788 MobiDBLite consensus disorder prediction 408 428 - -
Adu03g00480 788 MobiDBLite consensus disorder prediction 757 775 - -
Adu03g00480 788 SUPERFAMILY Protein kinase-like (PK-like) 442 696 IPR011009 -
Adu03g00480 788 Pfam Leucine rich repeat N-terminal domain 38 73 IPR013210 -
Adu03g00480 788 ProSiteProfiles Protein kinase domain profile. 374 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00480 Adu-Chr3 4345497 4350027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00480 33 587 Miscellaneous Gene Families AT2G16250 47.321 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Adu03g00480 PK_Tyr_Ser-Thr 6.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00480 - - adu:107476667 1479.15