Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00479 ATGCTATTTTTATGTCAAAAATGCAGCCTTTACCTTCTTCCATGCTCCTTTGTACCATTCAAATCAAAGTCCATCTGCAACCAAACTTCAACTTCCACCATTCTCAACTGCCATAACCCACATTCCCAAGATGCCCCAGATGAACATCATCAGAGCCCCGTTCACCGCAAACACAATTCCAAATCCACAAACTTTCTCCTTCAGAACCTTTCCCAGAACAACCAGAATCAGCAGCAACTCACTGCTCCCCAAAAGATTGAACTTGAAGAACACCCCATCATGCCCCACCAAGAAAAGGTGAAACTTTTGGAACTTTCCCTTGTTAGGAAGAGGACCCCTCAGTTCCCTGGTTCCATCTATGTTCAGTCCCCAAGTGACTCTGATGTGGGTTCTTCTCTTCCACCTATAAGAAACCTTTTTCAATCAAGTGTTGACAATGATGGTGGTGGCCATGTTGATGAAGAAGAGGAGGAGATGATAATGCGTGCAGTTGAGATTCGTAGGAAGGTGACTTTGGAGATTTTCAAAGAAGCCATGATGAAGGAGGGTAGGTTTGGAATCACTTACACTACTAACTTGGCTAATAGGCTGCAAGGTTTCCTTGACTATGTTATGATTGAAGCTGCTAGCTTGAAGAGGATGCCAGAATATTCTAACTCTAGTTTCAATTTGCGCGCCAAAACCGTCATTGAGGACTCCCAGGTTGTGCCACTTATCAGATGGTTGAAGCATAATGAACTATCATATCCTCAGATATCAAAGCTCATTTTATTGTCAAGAGGAAGAATTGATTTGATAAGGGACCGTGTCCAGTGGTTGAAGTCGATTCATGTGAAAGGGGAGTTCCTTGGGGTTGCGCTTGTTAAGGGTGGTGAGAATATTTTGCACCGCAGCTATAAGGAACTTGATGAGATTGTTGAGTATCTGGTGTCCAATGGAGTTAGGAGAGACTGGGTGGGTTATGTCATTAGTCGATGTCCTCAATTGTTGTCGTACAGCTTAGAAGAAGTGAAGACTCGTGTGGCGTTCTATGTCGATATGGGTATGAATGAGAAGGATTTTGGTACAATGGTTTTTGATTTCCCCAGAGCACTTGGTCACTTAACTATGGAAGAAATGAACCAAAAGGTTAATTACTTGAAAGAATTTGGGCTTAAAAATGAGGATGTTGGCAAGTTGCTAGCATTTAGGCCACAATTGATGGGTTGTAGCATTGAAGAACAGTGGAAACCTCTTGTTAAGTATTTCTACTATTATGGAATCACTAAAGATGGCATGAGGAGAATGCTTACCCTTAAACCAATGGTCTTTTGTACCGATTTGAAGTTGAATATTGTTCCAAAGGTAAAATTTTTTCAGGACATAGGGGTTAGAGATGATGCAATTGGCAACATGCTTGTGAAGTTTCCTACTCTACTCACTTACAGCCTCAACAAGAAGATTAGGCCAGTGGTTATATTCTTGATGACCAAAGCTGGAGTAACTGAGAAAGATATTGCCAAGGTTGTAGCTCTGGGACCTGAGCTCTTGGGATGCAGCATTGTACAAAAGCTTGAAGTAAATGTTAAATATTTTTTGTCTCTTGGCATACATGTCCGGCAGCTAGGTGAGATGGTTGCCGATTTCCCATTGCTGCTCAGATACAATCCCGATGTCCTTCGGCCTAAGTATGTTTATCTGCGGCGAACCATGATCCGACCTTTGCAAGATATCATCGAGTTTCCAAGGTTTTTCAGCTATTCTCTTGAAGGGCGAATTATCCCAAGACACAAGGTTCTTGTGGAGAATCAGCTTAATATTAAGCTGAGATACATGCTGGCTAGCAGTGATGTACAATTCAAGAAACTGGTCAATGATCTCATCAGAAAGCGCAACAAGTTTCAGTCTGGTGTTGCTGGCGAAGAGGAGGAAGAGACTCAATCCGAGGCTGTTATTCCAGGGGATACTGCTACTAAACTCCAATCATAA 1968 0.4228 MLFLCQKCSLYLLPCSFVPFKSKSICNQTSTSTILNCHNPHSQDAPDEHHQSPVHRKHNSKSTNFLLQNLSQNNQNQQQLTAPQKIELEEHPIMPHQEKVKLLELSLVRKRTPQFPGSIYVQSPSDSDVGSSLPPIRNLFQSSVDNDGGGHVDEEEEEMIMRAVEIRRKVTLEIFKEAMMKEGRFGITYTTNLANRLQGFLDYVMIEAASLKRMPEYSNSSFNLRAKTVIEDSQVVPLIRWLKHNELSYPQISKLILLSRGRIDLIRDRVQWLKSIHVKGEFLGVALVKGGENILHRSYKELDEIVEYLVSNGVRRDWVGYVISRCPQLLSYSLEEVKTRVAFYVDMGMNEKDFGTMVFDFPRALGHLTMEEMNQKVNYLKEFGLKNEDVGKLLAFRPQLMGCSIEEQWKPLVKYFYYYGITKDGMRRMLTLKPMVFCTDLKLNIVPKVKFFQDIGVRDDAIGNMLVKFPTLLTYSLNKKIRPVVIFLMTKAGVTEKDIAKVVALGPELLGCSIVQKLEVNVKYFLSLGIHVRQLGEMVADFPLLLRYNPDVLRPKYVYLRRTMIRPLQDIIEFPRFFSYSLEGRIIPRHKVLVENQLNIKLRYMLASSDVQFKKLVNDLIRKRNKFQSGVAGEEEEETQSEAVIPGDTATKLQS 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00479 655 Pfam mTERF 347 614 IPR003690 GO:0003690|GO:0006355
Adu03g00479 655 Pfam mTERF 266 346 IPR003690 GO:0003690|GO:0006355
Adu03g00479 655 SMART mt_12 536 566 IPR003690 GO:0003690|GO:0006355
Adu03g00479 655 SMART mt_12 285 315 IPR003690 GO:0003690|GO:0006355
Adu03g00479 655 SMART mt_12 391 422 IPR003690 GO:0003690|GO:0006355
Adu03g00479 655 SMART mt_12 320 350 IPR003690 GO:0003690|GO:0006355
Adu03g00479 655 SMART mt_12 500 531 IPR003690 GO:0003690|GO:0006355
Adu03g00479 655 SMART mt_12 427 458 IPR003690 GO:0003690|GO:0006355
Adu03g00479 655 SMART mt_12 463 495 IPR003690 GO:0003690|GO:0006355
Adu03g00479 655 SMART mt_12 355 386 IPR003690 GO:0003690|GO:0006355
Adu03g00479 655 SMART mt_12 568 599 IPR003690 GO:0003690|GO:0006355
Adu03g00479 655 MobiDBLite consensus disorder prediction 629 655 - -
Adu03g00479 655 Gene3D Transcription termination factor 3, mitochondrial 396 627 IPR038538 -
Adu03g00479 655 PANTHER CGI-12 PROTEIN-RELATED 77 637 IPR003690 GO:0003690|GO:0006355
Adu03g00479 655 MobiDBLite consensus disorder prediction 38 60 - -
Adu03g00479 655 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 77 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00479 Adu-Chr3 4342075 4345100 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Adu03g00479 mTERF 6.3e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00479 K15032 - zju:107426883 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00479 03 4342075 4345100 Adu03g00479 03 4342075 4345100 ECH