Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00474 ATGGCGGTTTCCGGTAACTCCTCCGGCGAACCTCTACCTGAATTGAACACAACATCATCGGTTCTAGGCGTGAAGCTCGTGGTTCTAGTTGCAATTATCTTCATTGCGATCGTGGTAACGATCTTGCTCATCTTCTTCCTCTGCTTCAGAAGAAGCAGAACCTCCTCTTGCAGAAACCACAGAACCCTCGGGAAACATAGCTCAGGAACAATCCCTCTGGTTTCAAAGGAGATCAACGTCGTCAAATCCCTAGATCTCGAACAACAACAGCAACAGCAACAGATTCTCGAAGACGTTGTTGTTGTTGATGATGATCTAAAGAAGAAGAAGAAGAAGGAGGAGGAGGAAGGTGAAGGCACCAAGAATAAAAAGAGTGAGGGAGAAGGGAGTGATGACGTGTCAATTTCCGGTGGGAGAAGGAGTGAGGCGTCGTCGATGTCGGTGGAGGATCCGAACATCGGGTGGGGGAGGTGGTATAGTCTGAAGGAGGTGGAGGTGGCGACACGTGGCTTCGCGGAGGAGAATGTCATTGGTGAAGGTGGCTATGGGATTGTATACAGAGGAGTTCTGCAAGATGGTTCTGTTGTTGCCGTCAAGAATCTTCTCAACAACAAGGGTCAAGCGGAGAAGGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTAAGGCATAAGAATTTGGTTGGGCTGGTAGGATATTGTGCAGAAGGTCCTAAAAGGATGCTTGTTTATGAATATGTTAACAATGGAAATTTGGAGCAGTGGCTGCATGGTGATGTAGGACCAGTGAGCCCCTTGACATGGGATATTCGGATGAAGATTGCCATTGGCACTGCTAAAGGgctagcttacttgcatgaaggcttagaacccaaagttgtgcaccgagatataaaatccagtaacattcttttggacaaaaactggaatgccaaagtatccgattttggacttgccaaGCTCTTAGGATCCGAGAAAACCCACGTGACTACGCGTGTAATGGGAACATTTGGATATGTGTCACCTGAATATGCAAGCACCGGTATGCTTAATGAGCGCAGTGATGTGTATAGCTTCGGAGTTCTTCTCATGGAGATAATTACAGGAAGATCCCCCATTGATTATTCTAGACCTCCTGGAGAGATGAATTTGGTTGATTGGTTCAAGGGAATGGTAGCAAATCGTCGTGGTGAAGAGTTAGTCGATCCTTTAATCGAGGTTCAGCCCTCTCAAAGATCCCTGAAGCGAATGTTACTCATTTGTCTTCGCTGTATTGATTTGGATGTTGTTAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTTGAGGCAGATGATTTTCCATTTCGTTCTGAAATTCGTACACTTAAAGAGAAAGACAATGTCCCTTCTGCTGCAGATGTTTCGAGTAAAAGAGTGCCATATGAATCAAAATATGCAGAGTCCATAGGAAAATCAAGATGGAAATAA 1470 0.4184 MAVSGNSSGEPLPELNTTSSVLGVKLVVLVAIIFIAIVVTILLIFFLCFRRSRTSSCRNHRTLGKHSSGTIPLVSKEINVVKSLDLEQQQQQQQILEDVVVVDDDLKKKKKKEEEEGEGTKNKKSEGEGSDDVSISGGRRSEASSMSVEDPNIGWGRWYSLKEVEVATRGFAEENVIGEGGYGIVYRGVLQDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGPKRMLVYEYVNNGNLEQWLHGDVGPVSPLTWDIRMKIAIGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVSPEYASTGMLNERSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKGMVANRRGEELVDPLIEVQPSQRSLKRMLLICLRCIDLDVVKRPKMGQIVHMLEADDFPFRSEIRTLKEKDNVPSAADVSSKRVPYESKYAESIGKSRWK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00474 489 SMART serkin_6 171 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g00474 489 Gene3D Transferase(Phosphotransferase) domain 1 247 455 - -
Adu03g00474 489 PANTHER OS01G0323000 PROTEIN 18 488 - -
Adu03g00474 489 SUPERFAMILY Protein kinase-like (PK-like) 146 443 IPR011009 -
Adu03g00474 489 CDD STKc_IRAK 177 443 - -
Adu03g00474 489 Pfam Protein tyrosine and serine/threonine kinase 174 442 IPR001245 GO:0004672|GO:0006468
Adu03g00474 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Adu03g00474 489 ProSitePatterns Protein kinases ATP-binding region signature. 177 199 IPR017441 GO:0005524
Adu03g00474 489 PANTHER RECEPTOR-LIKE KINASE 18 488 - -
Adu03g00474 489 Gene3D Phosphorylase Kinase; domain 1 138 246 - -
Adu03g00474 489 ProSiteProfiles Protein kinase domain profile. 171 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g00474 489 MobiDBLite consensus disorder prediction 110 135 - -
Adu03g00474 489 MobiDBLite consensus disorder prediction 110 148 - -
Adu03g00474 489 MobiDBLite consensus disorder prediction 460 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00474 Adu-Chr3 4310754 4314167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00474 139 443 Receptor kinase-like Gene Family AT4G02010 47.573 6.63e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Adu03g00474 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00474 - - lang:109351508 700.664