Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00458 ATGGAAGATCAGTTTTTCTCTGAGGGAGAGGGAATTGGGTATTGGACACCTCCTGGCGCTCAATTCGATGGACCAAGCAAGATAGACAACGGAATAAAAAATCTTGTATCAGAGGAGATGCTTGACAACCTCCCTGATCTCATGAACTTCGATAACCTTGCTGGTTGGGGTAATATTCCATCTGTGACTGATCATAATTTAGATAATGGAATTTCATCACTTGCCTCTATGCAGTATTCTCCACCTGATGCATTCAGTTTAGTGGAACAGGACAATGATCCATACTTTATGACAAAAGATTGTGGAAATTATAATGCTACTGAAACCTCCTTGGGTTTCGATGAGAAGGCTGTGTTACAGCAATTGGAGACCCAACTTGGGTTGTCAGAAGATGCAAATGATATAAATAACATAAATGGATCACTTCAAGAATTGAGTGCTGCTGACATGGGAAATTGCTTGGTGCCTAGACCATTTGCTTGGTCGCTTGATGAGAGAATGCTGAGGGCTATGGACTTGTTTAAGGAATCAGTTGGTGATGGAATATTGACACAAGTTTGGGCACCAATGAAGCATGGTAATGACTTCATCTTAAGCACAAGTGAGCAACCCTATTTGCTAGATCACATGCTAGCTGGATACCGAGACGTGTCGAGGCAATTTACCTTTTCTGCTGAAGATAAACCAGGGTCTTTTCTAGGGCTTCCCGGACGTGTGTTTATCTCCCAAATTCCTGAATGGACCTCCAATGTTGGGTACTACAATAAAAGTGAGTACCTGAGGGTGGAGCATGCAATTAATCACGAGGTTCGTGGATCAATTGCGGTTCCCATAATTGATACGCTTGCTGAACCACCTTGTTGTGCTGTACTAGAACTTGTCACTACAAAGGAAAAGACTGATTTTGACAAAGAACTAGAAATTGTTAGCAGTGCACTCCAGCTTGTTAATTTAAGGACTACTACGCCTCCACGACTTATGTCCCAGTGTCTATCAAATAACAAAAGAGCAGCTTTAACAGAGATAATTGATGTGTTACGAGCTGTGTGTCATGCGCATCGTTTGCCACTGGCATTGACATGGATCCCCTGTTATTATAGTGAGGGAGTAGGAGATGAAGCTTCAAGAATACGGATTAAAGATGGGGGTAAAATTCCTGGTGAAAAAACTGTACTATGCATTGAAGAATCAGCTTGCTATGTAAATGATATTGTGGTAGGAGGATTTGTTCATGCATGTGTTGAACATTATCTCGAGGAAGGGCAAGGTGTAGCTGGGAAAGCTCTTCAATCAAATCGTCCATTCTTCTGTCCGGATGTGAAGGCCTATAATATTAGTGACTATCCCCTTGTTCACCATGCTCGAAAATATAAGTTGAATGCTGCCGTTGCAGTCAGGCTAAGGAGTATTCATACCAATGATGATGATTACATAATAGAATTCTTTCTACCTGTCAATATGAATGGAAGTGAAGAACAGCAACTTTTATTAGACAATCTATCAGATACTGTGCAGAGAATGTGTCAGAGTTTGAGGTCAGTTTCGGATGCTGAATTATACGGGGTAGAAGGTTCGCAAGTGCAGTTTTCAAAGGAAGAAGGCTCTCATATGGCGCCGGATGGTGACCATGATTCGGTCCAGCCTATGTCCATGACAAACAATGAAACTGAAGCTGCTCATAACCAGGCAATGGATGGATCAAGAAAGCAGACTGAGAAAAAGAAAAGTTCAGTGGAGAAGAATTTTAGCTTGAGTGTTCTCCAGCAATATTTCTCCGGTAGTCTTAAAGATGCGGCTAAAAGCCTTGGTGTTTGCCCAACCACCCTGAAAAGGATATGCAGGCAACACGGAATTTCAAGATGGCCATCGCGCAAGATCAATAAAGTTAATCGTTCGTTAAAGAAAATACAAACCGTGCTTGACTCAGTCAAGGGTGTGGAAGGAGGACTGGAGTTTGATCCTTACAAGGGGGGATTTATGCCAGGAGGATCAAGCAACCAAGAAATTAATGCACATAAAAGTTCTCTCTTCGGGAAGAAATGTTCTGTAAAATATCCTGATCCTGCATCTGGTAGCAAAGGTGAGAATTTA 2091 0.4189 MEDQFFSEGEGIGYWTPPGAQFDGPSKIDNGIKNLVSEEMLDNLPDLMNFDNLAGWGNIPSVTDHNLDNGISSLASMQYSPPDAFSLVEQDNDPYFMTKDCGNYNATETSLGFDEKAVLQQLETQLGLSEDANDINNINGSLQELSAADMGNCLVPRPFAWSLDERMLRAMDLFKESVGDGILTQVWAPMKHGNDFILSTSEQPYLLDHMLAGYRDVSRQFTFSAEDKPGSFLGLPGRVFISQIPEWTSNVGYYNKSEYLRVEHAINHEVRGSIAVPIIDTLAEPPCCAVLELVTTKEKTDFDKELEIVSSALQLVNLRTTTPPRLMSQCLSNNKRAALTEIIDVLRAVCHAHRLPLALTWIPCYYSEGVGDEASRIRIKDGGKIPGEKTVLCIEESACYVNDIVVGGFVHACVEHYLEEGQGVAGKALQSNRPFFCPDVKAYNISDYPLVHHARKYKLNAAVAVRLRSIHTNDDDYIIEFFLPVNMNGSEEQQLLLDNLSDTVQRMCQSLRSVSDAELYGVEGSQVQFSKEEGSHMAPDGDHDSVQPMSMTNNETEAAHNQAMDGSRKQTEKKKSSVEKNFSLSVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVKGVEGGLEFDPYKGGFMPGGSSNQEINAHKSSLFGKKCSVKYPDPASGSKGENL 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00458 697 MobiDBLite consensus disorder prediction 546 565 - -
Adu03g00458 697 ProSiteProfiles RWP-RK domain profile. 561 649 IPR003035 -
Adu03g00458 697 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 5 691 - -
Adu03g00458 697 PANTHER PROTEIN NLP8 5 691 IPR045012 GO:0003700
Adu03g00458 697 MobiDBLite consensus disorder prediction 530 578 - -
Adu03g00458 697 Pfam RWP-RK domain 582 629 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00458 Adu-Chr3 4152897 4155682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00458 1 673 NLP Transcription Factor Family AT2G43500 50.358 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Adu03g00458 RWP-RK 1.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00458 - - ahf:112736799 1318.52