Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00438 ATGGAAGATTACGCTGCCAGCAGCGATGACGAATACCGTTACTCCGATCCGGAGGACTCCGTCGACGCCTTCGATAACGATGATAACGATTATCAATTAGTCTCTTCCAAGGGTCCCTCTACTCAGGTGATTACGAAGGAGTCATTGCTAGCTGCACAGAAGGAGGATTTACGCAGGGTGATGGACATGCTATCGGTGAGGGAGCAACATGCACGTACCCTGCTTATTTTTCATCGTTGGGATGTGGAGAAGTTGTTTGCCGTGTATGTAGATAGGGGAAAACATTTTCTGTTTTCTGAAGCTGGTGTTACAGTGGATGAACATCGCGACTCTAATTCGTCAGCTGCTCCTTCGACAATAATGTGCGAAATTTGCATAGAGGATGTTCCTAGTGATGAAACAACAAAAATGGACTGCGGTCACTGTTTTTGCAACGGCTGTTGGACAGAGCATTTTATTGTCAAGATAAATGAGGGTCAAAGCAAGCGAATCAGATGCATGGCACACAAATGTTATTCCATTTGTGATGAAGCTGTTGTCAGAACTCTTCTCAGCAAAAAGCACCCTGATATGGCAGAGAAATATGAACGCTTTCTTCTTGAATCCTATATTGAAGACAACAAGAGAGTTAAATGGTGTCCTAGTACGCCTCATTGTGGGAATGCAATACGTGTTGAGGACGATGAATTATGTGAGGTAGAATGTTCATGTGGTTTACAGTTTTGCTTCAGTTGCTTGTCAGAAGCACATTCCCCATGCTCATGTTTGATGTGGGAGCTTTGGGCCAAAAAGTGTCGAGATGAATCAGAAACTGTTAATTGGATAACAGTTCATACCAAGCCTTGTCCAAAGTGCCACAAACCGGTCGAGAAAAATGGTGGTTGTAACTTGGTTAGCTGTATCTGTGGTCAAGCTTTTTGTTGGTTGTGTGGTGGAGCTACTGGTCGAGAGCATACCTGGTCAAGCATTGCTGGTCATAGCTGTGGTCGCTATAAAGAGCAAGAAAAAACAGCTGAACGGGCAAAGAGGGATCTGTATCGTTATATGCATTATCATAATCGTTACAAAGCTCACACAGATTCCTTTAAGCTTGAGAGTAAACTGAAGGAGACTATACAAGAGAAGATTGCTGTCTCAGAAGAAAAAGATTCTACGCTAAGGGATTATAGTTGGGTAAATAATGGGCTCTCTAGACTTTTCAGATCTAGGCGTGTCCTATCATATTCATATGCATTTGCGTTTTACATGTTTGGTGACGAGCTATTTAAGGAAGAAATGACAGAAGCTCAAAGGGAAATAAAACAGAACTTGTTTGAGGATCAGCAGCAGCAGCTTGAGGCAAACGTTGAAAAGCTCTCCAAAATTTTAGAGGAGCCTTTTGAAACTTTTGAAGATGATAAAGTCATGGAGATAAGGATGCAGATAATCAATCTGACCACTATCATTGACAAACTTTGTCAAAAAATGTATGAGTGTATTGAGAATGATTTACTAGGTTCTCTCCATATTGGTGTTCACAACATTGCTCCATACAAGTCAAAGGGGATCGAGAAGGCATCAGAACTTTCAGTTTGTTGGACAAATGAGGCCAATAATACCGGTAAATTTCTATTGCAGTTTCTTGAATCGTAG 1632 0.4167 MEDYAASSDDEYRYSDPEDSVDAFDNDDNDYQLVSSKGPSTQVITKESLLAAQKEDLRRVMDMLSVREQHARTLLIFHRWDVEKLFAVYVDRGKHFLFSEAGVTVDEHRDSNSSAAPSTIMCEICIEDVPSDETTKMDCGHCFCNGCWTEHFIVKINEGQSKRIRCMAHKCYSICDEAVVRTLLSKKHPDMAEKYERFLLESYIEDNKRVKWCPSTPHCGNAIRVEDDELCEVECSCGLQFCFSCLSEAHSPCSCLMWELWAKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTWSSIAGHSCGRYKEQEKTAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKETIQEKIAVSEEKDSTLRDYSWVNNGLSRLFRSRRVLSYSYAFAFYMFGDELFKEEMTEAQREIKQNLFEDQQQQLEANVEKLSKILEEPFETFEDDKVMEIRMQIINLTTIIDKLCQKMYECIENDLLGSLHIGVHNIAPYKSKGIEKASELSVCWTNEANNTGKFLLQFLES 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00438 543 SUPERFAMILY RING/U-box 263 320 - -
Adu03g00438 543 ProSiteProfiles Zinc finger RING-type profile. 122 170 IPR001841 -
Adu03g00438 543 SMART ibrneu5 193 255 IPR002867 -
Adu03g00438 543 SMART ibrneu5 263 328 IPR002867 -
Adu03g00438 543 Pfam Ariadne domain 332 534 IPR045840 -
Adu03g00438 543 SUPERFAMILY RING/U-box 118 205 - -
Adu03g00438 543 SUPERFAMILY RING/U-box 193 261 - -
Adu03g00438 543 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 6 507 - -
Adu03g00438 543 Gene3D - 251 498 - -
Adu03g00438 543 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 116 208 IPR013083 -
Adu03g00438 543 Pfam IBR domain, a half RING-finger domain 193 255 IPR002867 -
Adu03g00438 543 MobiDBLite consensus disorder prediction 1 27 - -
Adu03g00438 543 ProSiteProfiles TRIAD supradomain profile. 118 332 IPR044066 -
Adu03g00438 543 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 6 507 IPR031127 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00438 Adu-Chr3 3973961 3977840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00438 61 522 ARIADNE family AT2G16090 73.978 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00438 K11968 - gmx:100783343 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00438 03 3973961 3977840 Adu03g00438 03 3973961 3977840 ECH