Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00412 ATGCAAGCTAAGCAGATCTTGTTATTCTTCCTCTCCAGTTTTGCATCATCAACGTTGAAAGAAAGCACCTTTGTGGAGATCTGGACAATATTTTTTTCCAGGCAGATCAAGAACTTCAATATACACTTTTTTGATATGATGAATACTTCAGCTGAGCAATCCTCCTTCTTCAAAGTCTTCCTTCCACAGTTTAGCTCTGAAAAATTGCTACTCCCAAAAGAGCATGTGGCATTGACAAGGATGAAAGAAAGGGTACCTGAGGAATTCATGCTGAGAAATGGAAGAGGAGGAGCATGGAGGGTGAAGACAAGTTGCATTGGTGAGAAGGTGTATTTTGATGATGGATGGAAGGAGTTTGTAAGGGATAATGGTATACAAGAAGCTTGTGTTATTATTGTTTTCAATCCAGATGGAAGCAGCACATTCGAGTTCAAGATCTTTGAATCATCAATGTGTGAAAAGACACAAACCTTGGAGGAGGCGGCGGCAGTGGAGATGGAGGAGTCATCAGAAGAAGAAGAAGAAGAAAATGATGATGATGAAGATTATGAGGATGAGGACGAGGATGAGGATGAGATGGATCATCATAGAGCTGGGAAAGCTCCTGCAAAAAGGAAAAGGGGAAATTACAATGATATTAAGGAGTATGGAGAAATTATTGCAACTTTTATTGATCAACACAATCCATACTTTGTTTTCAAAAGGAACAAATCCAGACCCAATGAACTGCATGTTCCATGTAAGCTCATTAAGGAGTACTCCATTACCATCCCAGAAACTATTAAATTATGTTGCAAGTATATCAAAGTGAACTCGCCGGAGAAAATTGTTGTTAAGAAACAAGCTTAG 849 0.391 MQAKQILLFFLSSFASSTLKESTFVEIWTIFFSRQIKNFNIHFFDMMNTSAEQSSFFKVFLPQFSSEKLLLPKEHVALTRMKERVPEEFMLRNGRGGAWRVKTSCIGEKVYFDDGWKEFVRDNGIQEACVIIVFNPDGSSTFEFKIFESSMCEKTQTLEEAAAVEMEESSEEEEEENDDDEDYEDEDEDEDEMDHHRAGKAPAKRKRGNYNDIKEYGEIIATFIDQHNPYFVFKRNKSRPNELHVPCKLIKEYSITIPETIKLCCKYIKVNSPEKIVVKKQA 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00412 282 MobiDBLite consensus disorder prediction 164 192 - -
Adu03g00412 282 ProSiteProfiles B3 DNA-binding domain profile. 54 150 IPR003340 GO:0003677
Adu03g00412 282 Coils Coil 166 186 - -
Adu03g00412 282 MobiDBLite consensus disorder prediction 159 204 - -
Adu03g00412 282 CDD B3_DNA 55 147 IPR003340 GO:0003677
Adu03g00412 282 Gene3D - 46 152 IPR015300 -
Adu03g00412 282 PANTHER B3 DOMAIN-CONTAINING 49 267 - -
Adu03g00412 282 SMART B3_2 56 150 IPR003340 GO:0003677
Adu03g00412 282 Pfam B3 DNA binding domain 56 149 IPR003340 GO:0003677
Adu03g00412 282 SUPERFAMILY DNA-binding pseudobarrel domain 51 152 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00412 56 209 B3 DNA Binding Superfamily AT3G06160 28.571 1.71e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu03g00412 B3 2.1e-12 CL0405