Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00408 ATGATGCATCATCATCATCAGCAGAACAAGCCTAATTCTTTCTGTGCAATCATCATGAATGGCCTCAACACCCATCACTTGAAAATACCAACCAAGTTTCTGAATTATTTGGACAAAAAATTGATGAGCAATGCAACTCTAATAGGCCCTTGTGGGGGCAAGTGGCAAGTGACCATAATCAAGAGAGAAAATGGAGTTTACATGGACCATGGTTGGTCAAAGTTTCTACAAGAAAACCTAGTCAAGCATGAGGATTTCTTGGTTTTCACATATGATGGAAATAATAACCATTTCAAGGTCCAAATATTTTGTAAAAATGGATGTGAAGCTCCAAAACCTAATGTGGGAAATGGTACAAAGAAGAGTAGACCAACAACTTCATGCCCACAGATTTCACCTGAAAATGAAAGATCATAA 417 0.3765 MMHHHHQQNKPNSFCAIIMNGLNTHHLKIPTKFLNYLDKKLMSNATLIGPCGGKWQVTIIKRENGVYMDHGWSKFLQENLVKHEDFLVFTYDGNNNHFKVQIFCKNGCEAPKPNVGNGTKKSRPTTSCPQISPENERS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00408 138 SMART B3_2 14 106 IPR003340 GO:0003677
Adu03g00408 138 Pfam B3 DNA binding domain 22 104 IPR003340 GO:0003677
Adu03g00408 138 PANTHER B3 DOMAIN-CONTAINING 7 119 - -
Adu03g00408 138 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0625400-RELATED 7 119 - -
Adu03g00408 138 SUPERFAMILY DNA-binding pseudobarrel domain 9 108 IPR015300 -
Adu03g00408 138 CDD B3_DNA 13 104 IPR003340 GO:0003677
Adu03g00408 138 MobiDBLite consensus disorder prediction 118 138 - -
Adu03g00408 138 Gene3D - 5 108 IPR015300 -
Adu03g00408 138 MobiDBLite consensus disorder prediction 114 138 - -
Adu03g00408 138 ProSiteProfiles B3 DNA-binding domain profile. 12 106 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00408 14 136 REM Transcription Factor Family AT3G06220 26.829 1.92e-15 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu03g00408 B3 6.6e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00408 - - gmx:100809844 108.997