Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00395 ATGACTAGCAGCTCTTTGAACTCAGATGATCCTTGTTTTGATGGTGATGGAAAATGGGCCACCAAGCTTCTTAGGGAGTGTGCTAGAGCAATCAATGATAGAGACTCAAGCAAAATCCAACACCTTCTATGGATGCTAAATGAGTTAGCTTCCCCTTATGGAGATTCTCAGCAGAAACTAGCCTCATATTTTCTTCAAGCTCTATTCTGCAAGGCCACTCAAACAGGCCAAAGATTTTACATGAATCTAAAATCAGCATCTGAAAAGAACCAATCTTTTGATTCAGCAAGAAAAATGATACTCAAATTTCAAGAGGTAAGTCCATGGACAACTTTTGGACATGTAGCTTCAAATGGTGCAATCTTGGAAGCCTTTTTAGAAGCAGGAGGAGAGAAAAACAAAAAGAAAAAGCTTCACATCATTGACATAAGCAACAACACTAGCACACTTTGCACTCAATGGCCTACTTTCTTGGAATCCTTGGCTACTAAGAGTAGTGATCATGTTGAAACTCCTCAATTGAAGCTCACAATTGTGTTGGTGAAAGAGAGCTTAAAAGGGTCAGTGATGAATGAAATTTGTCAGAGAATGGAGAAGTTTGCAAGGCTAATGAGAGTTCCCTTTGAGATTAACATGATAAATGGTGTGGAACATTTATGGAAGGTAACAAAAGAAGAGTTAGGAATAGTAGTTGAAGAAGAAGATGATGATGATGATGATGATGATGATGCTTTTATTGCTGTGAACTGTGTTGGGGGATTGAGGAGAGTTGAGGAGGGAGAAAGGGATAATGTGATTGGAATGTTGAAGTCTCTTAGTCCAAGAATTGTGACAACTGTTGAGGAAGAAAGTGGTGGTAGTGATGATTCTTGCATCACAAGAAATGATGATGATGACTTTGTAAAATGCTTTGAAGAGTGTTTATGGTTTTACAAGATTTACTTTGAGATGTTAGAGGAGAGTTTTCCAACAATAAGCAATGAAAAGTTAATGCTAGAGAGGGAGTGTTCAAGAAACATACTTGGTGATTTGGGTTGCAATAATGATAATAATAGTGATCATAATAAAAGGGAGAGGGGAGTAGAGTGGTCTATGAGGTTTAGGGAGTATTTTACTCCAATAGGTTTGAATGATGATGTTGTGGATGATGTTAGGGCATTGCTAAAGAGATATAATAGGTCAGGGTGGTCATTGATGTTGCCATCATCAAAAGTAGAAGGAATTTACTTGAAATGGAGGGATCAACCTGTTCTTTGGGCTTCAGCTTGGAAACCCTAG 1278 0.3826 MTSSSLNSDDPCFDGDGKWATKLLRECARAINDRDSSKIQHLLWMLNELASPYGDSQQKLASYFLQALFCKATQTGQRFYMNLKSASEKNQSFDSARKMILKFQEVSPWTTFGHVASNGAILEAFLEAGGEKNKKKKLHIIDISNNTSTLCTQWPTFLESLATKSSDHVETPQLKLTIVLVKESLKGSVMNEICQRMEKFARLMRVPFEINMINGVEHLWKVTKEELGIVVEEEDDDDDDDDDAFIAVNCVGGLRRVEEGERDNVIGMLKSLSPRIVTTVEEESGGSDDSCITRNDDDDFVKCFEECLWFYKIYFEMLEESFPTISNEKLMLERECSRNILGDLGCNNDNNSDHNKRERGVEWSMRFREYFTPIGLNDDVVDDVRALLKRYNRSGWSLMLPSSKVEGIYLKWRDQPVLWASAWKP 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00395 425 Pfam GRAS domain family 21 424 IPR005202 -
Adu03g00395 425 ProSiteProfiles GRAS family profile. 11 424 IPR005202 -
Adu03g00395 425 PANTHER PROTEIN SHORT-ROOT-LIKE 6 424 - -
Adu03g00395 425 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 424 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00395 Adu-Chr3 3609720 3610997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00395 5 425 GRAS Transcription Factor Family AT4G37650 47.248 3.38e-123 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu03g00395 GRAS 6.4e-72 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00395 - - adu:107477059 850.892