Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00388 ATGGATAAGGACAAATCCCCTGGTCATGGTGGAGGTTTTCCTCCTTCTGCTGGCCGTTTTTCGGGATTCTCAGCCTCAGCAACCCCTTTTAATGTGAAATCAGAGTTACCATCTTCATCAGCATTGCTTCCTCCTCTGCCAGTTCCGGCTGCAACCTCGGACTCTGCTAGTTTTAGTCATGACATTAGCAGAATGCCTGATAACCCTCCGAGAAATCGAGGCCATAGGCGTGCTCATTCAGAGATTCTCACTTTGCCGGATGATATTAGCTTTGAAAATGACCTTGGCATAGTTGGAGGAGGTGCTGATGGGCCCTCATTCTCCGATGACACTGAGGAAGACCTACTGTCCATGTACCTTGATATGGATAAATTCAATTTGCCGGCCGCTACAGGCGAGTTTGGAATTGGGGAGACTTCAATTGGTGGTGCAGCAACAGCAGCAGCAGTAGCATTGAGTTCAGCATTGGCATCAGGAGCCGCTGCCGCCTCTTCAGAAGACAACACTGCTGTTGGGACTAATGGAAGGCCTAGAGTGAGGCACCAGCATAGCCAGTCCATGGATGGATCCACAACCATCAAACCTGAGATTTTAGTCTCTGGCTTGGAAGAGGCCTCAGCAGTTGATTCCAAGAAGGCTATTTCGGCTGCCAAGCTTGCCGAGCTTGCCTTAATTGATCCAAAGCGTGCCAAGAGGATATGGGCCAATAGACAGTCTGCTGCTAGGTCGAAAGAAAGGAAGATGCGCTACATCGCCGAGCTTGAAAAGAGGGTACAGACATTGCAAACAGAAGCAACATCCTTGTCTGCACAATTAACTATCTTGCAGAGGGATACAGGTGGACTGAATGCCGAAAACAATGAGCTGAAAGTGCGGGTGCAATCGATGGAGCAACAAGTTCACTTGCAAGATGCGCTTAACGATGCATTAAAAGAGGAAATTCAGCATTTGAGAGTCCTTACCGGACAAGCTTTGCCAAATGGAGGAGCACCTATGAACTTTGCTTCATCAGTTGGAGGAGAACAACAATTCCAATCCAAAAATCAGTCCATGCACACCATTTTAGCTGCCCAGCAGTTACAACAACTCCAAATTCGCTCGCGGAAGCAACAGCATCAACAGCAGCTATTCCAGAACCATCAACCTCAGCATCTGCAGCAGTTTCAGCAGCCACAACCACCACAGCAACAACAGGAACATTAG 1203 0.483 MDKDKSPGHGGGFPPSAGRFSGFSASATPFNVKSELPSSSALLPPLPVPAATSDSASFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFENDLGIVGGGADGPSFSDDTEEDLLSMYLDMDKFNLPAATGEFGIGETSIGGAATAAAVALSSALASGAAAASSEDNTAVGTNGRPRVRHQHSQSMDGSTTIKPEILVSGLEEASAVDSKKAISAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELEKRVQTLQTEATSLSAQLTILQRDTGGLNAENNELKVRVQSMEQQVHLQDALNDALKEEIQHLRVLTGQALPNGGAPMNFASSVGGEQQFQSKNQSMHTILAAQQLQQLQIRSRKQQHQQQLFQNHQPQHLQQFQQPQPPQQQQEH 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00388 400 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 226 289 IPR004827 GO:0003700|GO:0006355
Adu03g00388 400 MobiDBLite consensus disorder prediction 1 20 - -
Adu03g00388 400 Coils Coil 244 278 - -
Adu03g00388 400 CDD bZIP_plant_RF2 229 278 IPR044759 GO:0003700|GO:0006355
Adu03g00388 400 SUPERFAMILY Leucine zipper domain 228 278 IPR046347 GO:0003700|GO:0006355
Adu03g00388 400 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 385 - -
Adu03g00388 400 SMART brlzneu 224 288 IPR004827 GO:0003700|GO:0006355
Adu03g00388 400 MobiDBLite consensus disorder prediction 162 190 - -
Adu03g00388 400 Gene3D - 227 279 - -
Adu03g00388 400 Coils Coil 293 313 - -
Adu03g00388 400 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 385 - -
Adu03g00388 400 MobiDBLite consensus disorder prediction 32 77 - -
Adu03g00388 400 MobiDBLite consensus disorder prediction 367 400 - -
Adu03g00388 400 Pfam bZIP transcription factor 228 277 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00388 Adu-Chr3 3527716 3530531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00388 19 357 bZIP Transcription Factor Family AT1G06070 67.059 4.11e-152 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Adu03g00388 bZIP_1 3.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00388 - - adu:107476759 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01120 08 20043427 20046562 Adu03g00388 03 3527716 3530531 PCT