Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00384 ATGAAAATTCAGTGTGATGTGTGTGAGAAAGTTCCAGCAACAGTGATCTGTTGTGCAGATGAAGCAGCTCTGTGTGCAAAATGTGATGTGGAGGTTCATAGTGCTAACAAGCTTGCAAGCAAACACCAGAGGCTTCTCCTTCAATGTCTCTCTAACAAGCTTCCAAGATGTGATATTTGCCAAGATAAGCCAGCTTTCATATTCTGTGTCGAAGACAGAGCACTCTTCTGTAAGGATTGCGACGAACCAATTCATTTAGCTGGCAGCCTTTCTGCGAACCACCAGAGGTTTCTTGCTACTGGAATTCGGGTGGCTTTGGGTTCTAATGACTGCTCCAAAAGTGATGAGAAAAGCCACTTGGAACCATCTAATCCAGCTGCGCAACAAGTTCCAAGGAAAGTTCCTTCTCAGCAATCGCCTAGCTTCACTCCCCCTAGCTTTTGGGCAGTTGATCAACTATTGGATTTACCAGAGTTTGGATCACCAGAGAAAAAACAAGCAGACGAATTTGGAGAGTTGGAATGGTTAGCAGATGTTGGTATCTTTGGTGAACAGTTTCCTCAGGAAACATTAGCTGCAGCTGAAGTTCCTCAGCTTCCTGTGTCACACACTAGCACTCTTGCACCATACACTTTTAAAGCCACTAATAAATCTTACATGTCTAGCAAAAAGCCTAGGATCGAAGTCTTAGGTGAAATAGATGATGAGCATTTCACTGTGCCTGATCTAGGCTAA 735 0.4381 MKIQCDVCEKVPATVICCADEAALCAKCDVEVHSANKLASKHQRLLLQCLSNKLPRCDICQDKPAFIFCVEDRALFCKDCDEPIHLAGSLSANHQRFLATGIRVALGSNDCSKSDEKSHLEPSNPAAQQVPRKVPSQQSPSFTPPSFWAVDQLLDLPEFGSPEKKQADEFGELEWLADVGIFGEQFPQETLAAAEVPQLPVSHTSTLAPYTFKATNKSYMSSKKPRIEVLGEIDDEHFTVPDLG 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00384 244 CDD Bbox1_BBX-like 57 98 - -
Adu03g00384 244 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Adu03g00384 244 MobiDBLite consensus disorder prediction 121 141 - -
Adu03g00384 244 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 244 - -
Adu03g00384 244 SMART bboxneu5 4 47 IPR000315 GO:0008270
Adu03g00384 244 SMART bboxneu5 52 99 IPR000315 GO:0008270
Adu03g00384 244 MobiDBLite consensus disorder prediction 113 141 - -
Adu03g00384 244 CDD Bbox1_BBX-like 5 47 - -
Adu03g00384 244 Pfam B-box zinc finger 52 94 IPR000315 GO:0008270
Adu03g00384 244 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Adu03g00384 244 PANTHER B-BOX ZINC FINGER PROTEIN 24 1 244 - -
Adu03g00384 244 Gene3D Classic Zinc Finger 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00384 Adu-Chr3 3480527 3483447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00384 1 164 Orphan Transcription Factor Family AT1G06040 66.071 5.36e-68 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Adu03g00384 zf-B_box 2.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00384 - - gmx:100779183 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01129 08 20145751 20147358 Adu03g00384 03 3480527 3483447 PCT