Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00380 ATGCCTCGCATTCCCCCAATTCTATTCCTTTTTTACTTCGCTGTGTTCACTTTGCAGCTCTTAACACAAGCGGTATCACGTTCGGTTTTCTACGTTAATCTAATTCTGATGGAGGTTGAGATTGATGGCTCTAATAATGGGGAGGCAATAGAAAATGCTGCCATGGCTGACGATTGTAGCACCGATGAAGGAAACAACGCAGATGAAGCAAACAATGCTGATGAAGGGAACAACGCTGACGAAGGAAACAATGGTGATGATGGAAATAACATCGATGGACGTGCTATTGTGTCAGTTCAAAGCCAAGGTCAAGATGTGACTCAAGTTTCTGCTGGAGGGGCCATAACCCTAGCTGTTCCCGCACTTCCGGTCCCAATTGTTTCACCTGTTGAACCTTATGTGGGACAGGAGTTTGAGTCAGAAGCAGAGGCACATGCATTCTACAATGCATATGCCACGAGTGTTGGATTCATCGTACGTGTTAGTAAACTCTCTCGATCAAGGATCGATAATTCTGCTATTGGGCGGATTTTTGTCTGCAACAAAGAGGGATACAGGATGACTGACAAGCGCGAAAATGTTATACGGCAAAGGGCTGAGACAAGGGTTGGTTGCAAGGCAATGATAATGGTAAGGAAAGTAAAATCTGGTAGCTGGGTTGTTACACGTTTTGTAAAGGAACACACACATCCTCTTGCTGGTCCAGGAGGTGGCAGAAGGGATTTCATCTACGAACAATATCCGGGCGAACGGGATAGAATTCGGGAACTAAATCAGCAGTTGACAGCAGAGAAAAAGAGGTCTGCCACCTACAAAAGACATCTTGAATTGATACTCGAGCACATTGACGAGTATAACGAGAGCCTATCGAAGAAAATACAGCACATAGTAGACAATGTAAAGGAGATGGAAAGCAAAGAAGAACAAAGTCAATTGAACTTTCAATTAGCCACCCTTTAA 960 0.4406 MPRIPPILFLFYFAVFTLQLLTQAVSRSVFYVNLILMEVEIDGSNNGEAIENAAMADDCSTDEGNNADEANNADEGNNADEGNNGDDGNNIDGRAIVSVQSQGQDVTQVSAGGAITLAVPALPVPIVSPVEPYVGQEFESEAEAHAFYNAYATSVGFIVRVSKLSRSRIDNSAIGRIFVCNKEGYRMTDKRENVIRQRAETRVGCKAMIMVRKVKSGSWVVTRFVKEHTHPLAGPGGGRRDFIYEQYPGERDRIRELNQQLTAEKKRSATYKRHLELILEHIDEYNESLSKKIQHIVDNVKEMESKEEQSQLNFQLATL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00380 319 Pfam FAR1 DNA-binding domain 147 232 IPR004330 -
Adu03g00380 319 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 69 309 - -
Adu03g00380 319 MobiDBLite consensus disorder prediction 58 92 - -
Adu03g00380 319 MobiDBLite consensus disorder prediction 65 85 - -
Adu03g00380 319 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 69 309 - -
Adu03g00380 319 Coils Coil 286 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00380 Adu-Chr3 3455758 3458088 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu03g00380 FAR1 4e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00380 - - adu:107476765 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01133 08 20191073 20191996 Adu03g00380 03 3455758 3458088 PCT