Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00370 ATGTATCCGAAACAGTCTGGCCAAGATGGCTCTGTTTCTGGTCCTGTGCGAACTAGTGATAGGATCAGGACAAGACCAAACATTTATGGCCGACCATTCATGTATTACAACACAAATCTTAGGCGGCGGAAGAAAAGCAAGAATAAGTCTAGGACAGCAGCTTCGATTGCCAAGATGCTGCGTCCAGGGAGCCGGAAGGCACAGGATTCAAATGCCAATTCTGGCTCTAGTAACCTTCGACGTTCAACTAGAAAGAGAAGGCTTAATGTAAATCTCGAAGGCTTTGCAACAGACAGCTCTGGAGCTGAGGATGAAGACTTAATGAGGCCTACGTATCGACCACCATTGAGAAATCGGATCAATAATAGCATCAACCAGGAAGAGTTGATGTCTAAGCACAAAAGAGCAGTGTCTACTAAATCAGCACCTAGACGTGAAGGTCTACGGCCTCGTCGTTCTAAGGCTGTGGCAAGAGAACAAGTAATTTCAGAATCAGATGATGGGCAAGACTTTTCAGAAGGCAAGGCAGAACAGGGTGAAACAGAAAATGGAAATGGTGAGGAAAATGATGCAGATGATGGTCAGAATGATATTGAAGGAGATGCTGAGGTGGAAGACGAAGGTGAGGATGATGAAGATGGTGATGATGAAGAGGGTGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAGCAGGATGGAAGAAGGCGCTATGATCTTAGAAATCGTTCTGATGTCCGTAGGTTTTCTATGGAAGAGGGGAAGACCCAACCAAGATCTCCTCGAAGAGTGTTACATCAAGGTATGGGAAATAAGGTTAGCAGGGATGTCAGGAAGGGTGGATCACGAGTTCATAAACGGCATCGCCTAGCAAGGGCTGAAGACTCTGATGACTCCCTTCTTGTGGATGAGCTGGACCAAGGGCCTGCCATTCCATGGGGTCGAGGTGGCAACAGATCTGGGCCCCCCTGGCTCTTTGGGGGCTTAGATACGCATGGAACAACAGCATGGGGATTAAACCTTGCTGCATCGGGTTGGGCCCATCAGAGTGATGCTTTGGCTACCTTGACAACTGGGATTCAAACTGCTGGACCAAGCTCTAAGGGAGGGGCAGATATCCAGCCCTTACAGGTGGATGATACTGTTAGTTTTGAGGATATAGGTGGGCTCTCTGAATACATTGATGCTCTTAAAGAAATGGTTTTCTTTCCATTATTGTATCCAGATTTCTTTGCTAGTTACCATATTACTCCTCCTAGAGGGGTGTTGCTATGTGGTCCCCCGGGAACTGGGAAAACATTAATTGCAAGAGCATTGGCTTGTGCTGCTTCAAAAGCCGGCCAGAAGGTTAGCTTTTACATGCGCAAAGGAGCGGATGTGCTAAGCAAGTGGGTTGGTGAGGCTGAGAGACAATTGAAGCTACTCTTTGAAGAAGCACAAAGGAATCAACCTTCTATCATCTTCTTTGATGAAATAGATGGACTTGCACCTGTGAGGTCTAGCAAGCAAGAACAAATTCACAATTCCATTGTGTCCACTTTGCTTGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTTTTAATTGGAGCTACCAATAGGATTGACGCTATTGATGGAGCTTTACGGCGCCCTGGTAGATTTGATCGTGAATTTAATTTTCCTTTGCCTGGTTGTGAGGCACGTGCCGAAATATTAGATATTCATACTCGCAAGTGGAAGCATCCACCTTCAAAGGATCTGAAAAGGGAACTTGCAGCTAGTTGTGTAGGTTACTGTGGTGCTGATCTAAAGGCTCTATGTACTGAAGCTGCCATTCGTGCTTTCCGTGAAAAATACCCACAGGTTTATACAAGTGATGACAAATTTCTTATAGACGTGGATTCGGTCAAGGTAGAAAAGTATCATTTTGTTGATGCAATGTCTACAATTACCCCTGCTGCTCACAGGGGAGCTATAGTGCACTCTAGGCCATTATCTCTTGTAGTTCAACCGTGTCTTCAGAGACATCTAGAAAGGGTCATGAGTATTATATCTGATATTTTCCCCCCAGTTTCTGTTGCATCAGAACTGACTAAATTTTCAATGCTTTCCTATGGGTCTGCAATTCCACTTGTTTATCGACCTAGACTCCTACTTTGTGGTGGTGAAGGTACTGGGCTGGATCATCTTGGGCCTGCGGTTTTACATGAACTGGAAAAATTTCCTGTACATTCATTAGGACTTCCATCTCTGCTGTCAGATCCTAGTGCTAAGACACCAGAGGAGGCATTGGTACACATATTTGGCGAAGCTAGAAGAACCACACCATCAATTCTCTATTTACCACAATTTGATGTTTGGTGGGAAACTGCTCATGAACAACTCAGAGCTGTTCTCCTGACTTTGCTAGATGAATTGCCATCTGACATGCCTATCCTTCTACTGGGAACATCCTCAGTTGTGCTTGCTGAAGTTGAAGATGTACCACATTCAGTTTTCCCTCATCGCTCAGTCTATGAAGTGAACATGCCATCTACTGAGGATAGGACCCTGTTTTTCAATCGTTTAATTGAAGCTGCTATGTCAGTCTTGTTAGAAAGAATGAGTGAGAAATCCGATAATAAAGGACACCTTCCTGAACTTCCCAAGGCACCAAAGTTGGCCACTGGTCCTAAGGTATCTGAGCTAAAAGCAAAGGTAGAAGCTGAGCAACATGCACTTCGCAGATTGCGAATGTGCCTAAGAGATGTTTGCAATCGGATATTGTATGACAAACGATTTAATGCCTTCCATTATCCAGTCTCTGATGAAGACGCACCTAATTATCGAATAGATATGGCAACTTTGCTGCATTATGTTGATAATGGCCATTATATCACATGTGCAGCATTCATGCAGGATATTGATCTTATTGTTTCCAATGCAAAGGCTTACAATGGAGAGGACTACAATGGTGCTAGAATTGTCAGCAGAGCCTGTGAGCTGCGTGATGCGGTGCAAGGGATGATCTCACAGATGGATCCAGCACTGGTTGCATACTGTGACAAGATTGCTAGCCAAGGAGGTCCAGCCCAGTTGCCTGATGAATTAGGGGTATCCACTTTCCCTGCAACTCCTGTTGTACAGCTGAGTGCTGCTACTAGAACAAGTGCTCGACTTCGTCATGTCCAACCGGAGGTTAATGTGGATCAGAGTTATGAAGCACTGAAGCGGACAAAGAAGACAGTTGATATTGCACATCCAGTGGCGGAGGAGAAGTCTCCAGAAGATTCTTTACCATCTAAGCCTCCCCCGGAGCATCAGACAAATGAAATGGATTCTGAAATGGTAGAACCTGTGACGATCGATGGAAATTCACATGGAACTTCTACGAGTAGCCAAGATGATGGTGGCAGAAATCTTGAGGATGTCACAATGGTGGATGGTGAATTTTCAGGAAAAGTGGAGTCTTTAAAGGAACAATTTGTTAAGCGCAGTGACAATTGCAGCGTTCCACAACTTGAAAGGCTTTACACAAGGATTATGAAGGGTGTGTTTGAAAGCAGAGATAAAGGTGATGATGTTAAGGCTTCGGTTTTGAAGTTTTTGTCGAAATTTGTAGAGGATGATGCAAATTTCTGA 3618 0.445 MYPKQSGQDGSVSGPVRTSDRIRTRPNIYGRPFMYYNTNLRRRKKSKNKSRTAASIAKMLRPGSRKAQDSNANSGSSNLRRSTRKRRLNVNLEGFATDSSGAEDEDLMRPTYRPPLRNRINNSINQEELMSKHKRAVSTKSAPRREGLRPRRSKAVAREQVISESDDGQDFSEGKAEQGETENGNGEENDADDGQNDIEGDAEVEDEGEDDEDGDDEEGEEEEEEEEEEEEEEEEQDGRRRYDLRNRSDVRRFSMEEGKTQPRSPRRVLHQGMGNKVSRDVRKGGSRVHKRHRLARAEDSDDSLLVDELDQGPAIPWGRGGNRSGPPWLFGGLDTHGTTAWGLNLAASGWAHQSDALATLTTGIQTAGPSSKGGADIQPLQVDDTVSFEDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKHPPSKDLKRELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVKVEKYHFVDAMSTITPAAHRGAIVHSRPLSLVVQPCLQRHLERVMSIISDIFPPVSVASELTKFSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFDVWWETAHEQLRAVLLTLLDELPSDMPILLLGTSSVVLAEVEDVPHSVFPHRSVYEVNMPSTEDRTLFFNRLIEAAMSVLLERMSEKSDNKGHLPELPKAPKLATGPKVSELKAKVEAEQHALRRLRMCLRDVCNRILYDKRFNAFHYPVSDEDAPNYRIDMATLLHYVDNGHYITCAAFMQDIDLIVSNAKAYNGEDYNGARIVSRACELRDAVQGMISQMDPALVAYCDKIASQGGPAQLPDELGVSTFPATPVVQLSAATRTSARLRHVQPEVNVDQSYEALKRTKKTVDIAHPVAEEKSPEDSLPSKPPPEHQTNEMDSEMVEPVTIDGNSHGTSTSSQDDGGRNLEDVTMVDGEFSGKVESLKEQFVKRSDNCSVPQLERLYTRIMKGVFESRDKGDDVKASVLKFLSKFVEDDANF 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00370 1205 Gene3D - 384 654 IPR027417 -
Adu03g00370 1205 Pfam AAA+ lid domain 589 625 IPR041569 -
Adu03g00370 1205 Gene3D - 695 855 IPR027417 -
Adu03g00370 1205 MobiDBLite consensus disorder prediction 1 244 - -
Adu03g00370 1205 MobiDBLite consensus disorder prediction 1081 1134 - -
Adu03g00370 1205 Coils Coil 214 241 - -
Adu03g00370 1205 Gene3D - 562 647 - -
Adu03g00370 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 710 923 IPR027417 -
Adu03g00370 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 650 IPR027417 -
Adu03g00370 1205 SMART bromo_6 906 1007 IPR001487 GO:0005515
Adu03g00370 1205 MobiDBLite consensus disorder prediction 277 296 - -
Adu03g00370 1205 SUPERFAMILY Bromodomain 904 1012 IPR036427 GO:0005515
Adu03g00370 1205 MobiDBLite consensus disorder prediction 1115 1131 - -
Adu03g00370 1205 PANTHER BNAC08G44480D PROTEIN 1 1200 - -
Adu03g00370 1205 MobiDBLite consensus disorder prediction 1 20 - -
Adu03g00370 1205 Pfam ATPase family associated with various cellular activities (AAA) 426 561 IPR003959 GO:0005524|GO:0016887
Adu03g00370 1205 Pfam Bromodomain 920 981 IPR001487 GO:0005515
Adu03g00370 1205 PANTHER AAA DOMAIN-CONTAINING 1 1200 IPR045199 -
Adu03g00370 1205 MobiDBLite consensus disorder prediction 128 182 - -
Adu03g00370 1205 CDD AAA 706 844 - -
Adu03g00370 1205 CDD AAA 422 561 - -
Adu03g00370 1205 Gene3D - 898 1020 IPR036427 GO:0005515
Adu03g00370 1205 MobiDBLite consensus disorder prediction 183 236 - -
Adu03g00370 1205 ProSitePatterns AAA-protein family signature. 531 549 IPR003960 GO:0005524|GO:0016887
Adu03g00370 1205 SMART AAA_5 422 563 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00370 Adu-Chr3 3374417 3381377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00370 372 626 Calmodulin-binding Proteins AT3G56690 36.680 2.21e-41 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00370 K22531 - gmx:100787765 1915.58