Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00346 ATGTCCACCAACGACATGGATTTCCCATTACCACCCTTACCCTCACCACCACCACCACCACCACCAACAACAACCCCTCACCCTCTTAACCTAGACAACCTTAAAGCCCTCAAAATCCTTGGCAAAGGTGCCATGGGCACCGTCTTCCTCGTCCACGACATCACCGCCACCTCTACCACCTTCTTCGCCCTCAAGGTCGTCGATAAAACCACCCACCACGGCAAGCTTGACGCCGACCGCCGCGCCCGCTGGGAAATCGAAGTCCTCTCCAAGCTCTCCAGCCACCCCTTCCTCCCTTCCCTCCTGGGCTCCCTCGACACTCCGGACTTCCTCGCCTGGGCCCTACCATACTGCCCCGGTGGCGACCTCAACCGCCTCCGCTACCGGCAAAACGACCGCGTGTTCTCCCCCTCCGTCATCCGGTTCTACCTCGCGGAGATTCTGTGCGCCCTCCACCACCTCCATTCCCTCGGTATCGCGTACCGTGACCTCAAACCGGAAAATGTCCTCATCCAACACAACGGTCACGTGACACTCACGGACTTCGACCTCTCACGCAAACTCACACCCAAAACCGTTGCAACAACCTCTCATACGGTTACAACAGTTGCAACTGACATTACCAACAAAGGTAACAGCATTCCGCCATCGGTTCCCACGGATCCTAATAAGATTCCATCAGAACCTCCTCATCGCAGGAGACACCGCCGGAACTTCACCCGCTGGTTCCCGCTCCACTCGCCGGATGCAGCTCGTAAGAACTTGAAGAAAGTGAAATCCGCCAGAGTCAGCCCCGTGAGTCGACGCAGGACGAGTTTCATCGGCGACGGCGAGAGGTCCAACTCGTTCGTCGGTACCGAGGAGTACGTGGCGCCGGAGGTGGTGCGCGGCGAGGGACACGATTTCGCCGTGGATTGGTGGGCGCTGGGGATTCTGGCGTATGAGATGATGTACGGTACGACGCCGTTTAAGGGGAAGAACCGCAAGGATACGTTCCGGAATGTGTTAGTGAAGTCGCCGGAGTTCGTTGGAAAACGGTCGTCGCTGACGGATCTCATCGAGAAGCTTCTGGAGAAGGAACCGACGGCGAGATTGGGGTACACTCGCGGAGCCGATGAGATCAAGGAGCACAAGTTCTTCCGAGGTGTAAGGTGGGACATGTTGACGGAGGTGGTGCGGCCGCCGTTCATTCCGGGAAGGAACGACGCCGGATCCCGTGAATCGATGGAGGGTTTGTTAGGTGGAGAGGGCGGCGTGAACATTAGAGATTATTTTCAAAGGTCGCGGTTGCCGCCGTCTTTGCCACCCTCGCCGTTGCCCTCGCCATCCGGCAAGTTCAAGAGGAATGTTTCTCTATCGGAATTCTAA 1368 0.5753 MSTNDMDFPLPPLPSPPPPPPPTTTPHPLNLDNLKALKILGKGAMGTVFLVHDITATSTTFFALKVVDKTTHHGKLDADRRARWEIEVLSKLSSHPFLPSLLGSLDTPDFLAWALPYCPGGDLNRLRYRQNDRVFSPSVIRFYLAEILCALHHLHSLGIAYRDLKPENVLIQHNGHVTLTDFDLSRKLTPKTVATTSHTVTTVATDITNKGNSIPPSVPTDPNKIPSEPPHRRRHRRNFTRWFPLHSPDAARKNLKKVKSARVSPVSRRRTSFIGDGERSNSFVGTEEYVAPEVVRGEGHDFAVDWWALGILAYEMMYGTTPFKGKNRKDTFRNVLVKSPEFVGKRSSLTDLIEKLLEKEPTARLGYTRGADEIKEHKFFRGVRWDMLTEVVRPPFIPGRNDAGSRESMEGLLGGEGGVNIRDYFQRSRLPPSLPPSPLPSPSGKFKRNVSLSEF 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00346 455 PANTHER FLIPPASE KINASE 1-RELATED 29 429 - -
Adu03g00346 455 Pfam Protein kinase domain 36 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g00346 455 Pfam Protein kinase domain 276 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g00346 455 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 29 429 - -
Adu03g00346 455 ProSitePatterns Protein kinases ATP-binding region signature. 40 65 IPR017441 GO:0005524
Adu03g00346 455 MobiDBLite consensus disorder prediction 9 27 - -
Adu03g00346 455 MobiDBLite consensus disorder prediction 424 455 - -
Adu03g00346 455 MobiDBLite consensus disorder prediction 1 28 - -
Adu03g00346 455 Gene3D Phosphorylase Kinase; domain 1 32 117 - -
Adu03g00346 455 MobiDBLite consensus disorder prediction 207 238 - -
Adu03g00346 455 SMART serkin_6 34 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g00346 455 Gene3D Transferase(Phosphotransferase) domain 1 276 399 - -
Adu03g00346 455 SUPERFAMILY Protein kinase-like (PK-like) 15 397 IPR011009 -
Adu03g00346 455 Gene3D Transferase(Phosphotransferase) domain 1 118 201 - -
Adu03g00346 455 ProSiteProfiles Protein kinase domain profile. 34 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g00346 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00346 Adu-Chr3 3104861 3106573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00346 29 432 AGC Kinase Gene Family AT1G51170 57.317 1.15e-153 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Adu03g00346 Pkinase 1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00346 - K08286 adu:107476791 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01170 08 20671988 20673352 Adu03g00346 03 3104861 3106573 PCT