Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00344 ATGAACTCATCTTCAAACAATAATAACTGGCTTTCGTTCCCTCTTTCACCAACTCATCATCAAGCCACTACTCAATATCATCAATTCCCTCTTGGCTTTGTCAACGACACCATCGAAAATCCTTTCCACAATCATGATTGGAATAATGTGATAAATGGTGGTGAGAGCAGCAATAAGAATGATGAAGTTCCAAAGGTAGCGGATTTCCTTGGTGTGAGGAAGGCAGAGGAAGATTCATCATCATCAGATCTTGTTGCCCTCACTACACACCTCTTCACCGGTAACAGTGTCTTGCCGTTGCAGCAAAACAACAACTATGAGGTGGAGGAGCAGCAGTTTCAAACAAATAATAATCTGCAAGCACTCACATTGTCCATGGGAAGTGGTAGTAATAATAATAATAATAATAATAATAATAAGGATTCATCAACAACCAGCTGTGACAATAACAACATTATTGAAGCCCCACCTTCTAATAGAAGAACTCTAGATACCTTTGGCCAGAGAACTTCAATATACTGTGGCGTAACAAGACATAGATGGACCGGAAGATATGAAGCTCATCTTTGGGATAATAGCTGCAGAAGGGAAGGACAATCAAGAAAAGGTCGCCAAGGTGTGTGTGGATATGATAAAGAAGATAAAGCAGCTAGGGCTTATGATTTGGCTGCATTGAAGTATTGGGGGACATCCACTACTACCAACTTTCCTATCAGCAACTATGAGAAGGAATTGGATGATATGAAACACATGACAAGGCAAGAATTTGTAGCCGCCATAAGAAGGAAAAGTAGTGGTTTCTCGAGAGGTGCATCAATGTATCGTGGAGTCACAAGGTCGCATCACCAACATGGGAGATGGCAAGCAAGAATTGGAAGGGTAGCCGGAAACAAAGATCTTTACTTAGGAACATTTAGTACGGAAGAAGAGGCTGCAGAAGCTTATGACATAGCAGCCATAAAGTTCAGAGGCCTTAACGCCGTTACGAACTTCGACATGAGCCGTTACGACGTCAAAGCCATTCTTGAAAGCAACGCTCTCCCAATTGGAGGTGGTGCTGCTAAGAGATTGAAAGAAGCACAAGCTTTGGAATCTTCTAGAAAACGAGAACAGTTGCTTGCACTCGGAGCTGGTGCCTCTTCTTCTTCTTCTACTAGGTTCCCTTTCATGCAGCAGCACCACCAGTTCAATCAAGAGCTTCAGATTCAACCATTGTTAAACCTACAGAACCACGAGGTTTCTCATTATCAATTCATGCAGCAGGATCTTTCTTCTTCTTCTTCTTCTCCTTCTCCTTCTCCTTCATCGTTGCTTCATCACAGTTATCTGCAAACGCAGATTCAGTTACACCAACAGAATGCTCAGTTTTACAACAGTTACCTTCATGGAATGATCAACATTGGTTCTTCTCCTTCTTCTTTTTCGCTCATGGATAACAATAATAATAATAATAATAATAACATGCTTGGTTTGGCTTCCAATAATTCTTCTTCCGAGGAACTTGCGTTGGTTAAGGTTGACTATGATATGAATCCTGGCGGTTATGGCGGTTGGCCAGGAACCACGGAGACAGCGTCGGAGTCTATGCAGGAACAAAGTGGCGGTGTTTTTACAATGTGGAATGATTAG 1629 0.4199 MNSSSNNNNWLSFPLSPTHHQATTQYHQFPLGFVNDTIENPFHNHDWNNVINGGESSNKNDEVPKVADFLGVRKAEEDSSSSDLVALTTHLFTGNSVLPLQQNNNYEVEEQQFQTNNNLQALTLSMGSGSNNNNNNNNNKDSSTTSCDNNNIIEAPPSNRRTLDTFGQRTSIYCGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGVCGYDKEDKAARAYDLAALKYWGTSTTTNFPISNYEKELDDMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRSHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNALPIGGGAAKRLKEAQALESSRKREQLLALGAGASSSSSTRFPFMQQHHQFNQELQIQPLLNLQNHEVSHYQFMQQDLSSSSSSPSPSPSSLLHHSYLQTQIQLHQQNAQFYNSYLHGMINIGSSPSSFSLMDNNNNNNNNNMLGLASNNSSSEELALVKVDYDMNPGGYGGWPGTTETASESMQEQSGGVFTMWND 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00344 542 MobiDBLite consensus disorder prediction 523 542 - -
Adu03g00344 542 ProSiteProfiles AP2/ERF domain profile. 172 237 IPR001471 GO:0003700|GO:0006355
Adu03g00344 542 MobiDBLite consensus disorder prediction 419 438 - -
Adu03g00344 542 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 9 541 - -
Adu03g00344 542 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 9 541 - -
Adu03g00344 542 Gene3D AP2/ERF domain 273 334 IPR036955 GO:0003700|GO:0006355
Adu03g00344 542 Gene3D AP2/ERF domain 172 239 IPR036955 GO:0003700|GO:0006355
Adu03g00344 542 SUPERFAMILY DNA-binding domain 272 334 IPR016177 GO:0003677
Adu03g00344 542 PRINTS Ethylene responsive element binding protein signature 314 334 IPR001471 GO:0003700|GO:0006355
Adu03g00344 542 PRINTS Ethylene responsive element binding protein signature 173 184 IPR001471 GO:0003700|GO:0006355
Adu03g00344 542 SMART rav1_2 273 338 IPR001471 GO:0003700|GO:0006355
Adu03g00344 542 SMART rav1_2 172 243 IPR001471 GO:0003700|GO:0006355
Adu03g00344 542 MobiDBLite consensus disorder prediction 125 158 - -
Adu03g00344 542 CDD AP2 272 334 IPR001471 GO:0003700|GO:0006355
Adu03g00344 542 ProSiteProfiles AP2/ERF domain profile. 273 332 IPR001471 GO:0003700|GO:0006355
Adu03g00344 542 CDD AP2 171 239 IPR001471 GO:0003700|GO:0006355
Adu03g00344 542 SUPERFAMILY DNA-binding domain 171 239 IPR016177 GO:0003677
Adu03g00344 542 Pfam AP2 domain 173 229 IPR001471 GO:0003700|GO:0006355
Adu03g00344 542 Pfam AP2 domain 274 324 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00344 Adu-Chr3 3077004 3079587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00344 6 542 AP2-EREBP Transcription Factor Family AT3G20840 55.276 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Adu03g00344 AP2 7.2e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00344 K09285 - gmx:100788471 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00344 03 3077004 3079587 Adu03g00344 03 3077004 3079587 ECH