Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00337 ATGAGTTGGAATCCACACATGGAAATCCACCATTACAATAACATCAGCTATCCCTATAGTACAGCAGGAAGCTTTATTGAATATTTCGAAGGTCTCACATATGAACATGTCAATTTCATCTTTTCTGGTGCATCACATGCTCAGGAAAGTTCATACCCTTCAACTACAAGCTTTTATAAGTTTGGACTTTCTGAACCTGACAGCACTTCATACTATCGTTATAATCATGGTTATGATGTAAATCATCATCATGAACCACTGGTTGACGAATATAGGAGGCCTTTGGAAAACTCAACGACTGTCAATGAGCATACTGCAGCTGTAAATACAGAATGGGGAGAAGGGGTAAACAATACCACACGAGACAATTCTATTGAGTGTCCACGAAGACATCATAGTAATTCCAATGATTATCAGGTTGTTTGGCAAGACAGTATTGATCCTGACAACATGACCTACGAGGAACTACTTGAATTAGGTGAAGCTGTTGGAACCCAAAGCCGTGGTCTTACCCAAGAGCAGATTTCGATGCTTCCAGTTTCAAAGTACAAGTGTGGGTTCTTCTCAAGGAAGAAGTCGAAGGATGAGAGGTGTGTGATTTGCCAGATGGAGTATAAAAGAGGGGACAAGCGGATCACTTTGCCTTGTAAACATCTCTATCATGCTAGTTGCGGGGCCAGATGGCTTAGCATCAATAAGGCTTGTCCTATATGTTACAGGGAAGTGTTTTAG 732 0.4112 MSWNPHMEIHHYNNISYPYSTAGSFIEYFEGLTYEHVNFIFSGASHAQESSYPSTTSFYKFGLSEPDSTSYYRYNHGYDVNHHHEPLVDEYRRPLENSTTVNEHTAAVNTEWGEGVNNTTRDNSIECPRRHHSNSNDYQVVWQDSIDPDNMTYEELLELGEAVGTQSRGLTQEQISMLPVSKYKCGFFSRKKSKDERCVICQMEYKRGDKRITLPCKHLYHASCGARWLSINKACPICYREVF 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00337 243 SUPERFAMILY RING/U-box 189 242 - -
Adu03g00337 243 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 243 IPR033276 GO:0004842|GO:0016567|GO:0046621
Adu03g00337 243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 160 243 IPR013083 -
Adu03g00337 243 ProSiteProfiles Zinc finger RING-type profile. 198 238 IPR001841 -
Adu03g00337 243 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 243 - -
Adu03g00337 243 Pfam Ring finger domain 197 238 IPR001841 -
Adu03g00337 243 SMART ring_2 198 238 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00337 Adu-Chr3 3033559 3035832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00337 4 243 C3H Transcription Factor Family AT3G63530 42.683 6.35e-61 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00337 K19045 - gmx:100805963 455.292