Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00300 ATGGGTGAGGAAGTTAGGATGACCGACTACCAAGACGACGACGGAGTCGCCGACTGGGAATTGGGCCTTCCGGCGGCCCACGATCTCACCCCGCTCTCTCAGCTCTTGATCCCGCCGGAGCTCGCCTCCGCCTTCAGCATCTCGCCGGAGCCACACCGTTCCCTTGTCGACGTTAATCGCGCCTCAAAGAACACTTTCTCCACCCTCCGTACCGGCGTCAACGCCTTCTCCTCCTCCAACCTCAACCCCTTCCAAGACGAGGGAAACGATCCCGCCGGCGACGACGAGGAAGAGATCGATCCGGCCGGTTCGGGATCCAATTCGAGGAAGCTCCGGAAGGTCGATTGTGCGGAGGAAGCGGATTCTGTGCCGCGCACCGACAGTGCCGCCGCCGTGAAGCGACCGAGGCTTGTGTGGACACCGCAGCTGCACAAGCGATTTGTGGACGTGGTGGCGCACCTAGGGATCAAGAACGCGGTGCCGAAGACGATCATGCAGCTTATGAACGTGGAAGGGTTGACCCGAGAGAACGTCGCCAGCCACCTCCAGAAGTATCGCCTCTATCTTAAGCGGATGCAAGGGCTCTCCGCCGACGGACCTTCTTCCTCCGACCACCTCTTCGCCTCCACGCCGGTTCCTCAAAGCCTCAATGACAGCGGCGGAGGAGGAGCAGGAGGAGGTGGAAGTGGCCACTCCCGTGGGAACGGGCACCTTCCGGTTCCGGTCCCGATGCATTATCCTCCGGCGGCAATGATGCCAATGCCGATGCTCGGCATGCCACATGGCTTTCATCATCACCATGTGTTGCAGCAGAGGGATTGGTCCTACCCACCACATATTGGAGTGCCTGCTCTTACTTCTCTTGGTGGTCATGGACTCATGGACATGTTACGAACTGATCAGCACGATTTAAGCTTAATTTTGAGCAAGCAACAAATTTGTGAAATAGATTTCTTAAAAGTAACGGAAAGATTCAAAGAAAGGGTAAAGTTGGTTGGAAGACAATCAAAGGAAACTTGA 1020 0.5676 MGEEVRMTDYQDDDGVADWELGLPAAHDLTPLSQLLIPPELASAFSISPEPHRSLVDVNRASKNTFSTLRTGVNAFSSSNLNPFQDEGNDPAGDDEEEIDPAGSGSNSRKLRKVDCAEEADSVPRTDSAAAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSADGPSSSDHLFASTPVPQSLNDSGGGGAGGGGSGHSRGNGHLPVPVPMHYPPAAMMPMPMLGMPHGFHHHHVLQQRDWSYPPHIGVPALTSLGGHGLMDMLRTDQHDLSLILSKQQICEIDFLKVTERFKERVKLVGRQSKET 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00300 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 190 IPR017930 -
Adu03g00300 339 Pfam Myb-like DNA-binding domain 138 186 IPR001005 -
Adu03g00300 339 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 135 187 IPR006447 GO:0003677
Adu03g00300 339 MobiDBLite consensus disorder prediction 77 130 - -
Adu03g00300 339 MobiDBLite consensus disorder prediction 199 217 - -
Adu03g00300 339 Gene3D - 131 193 - -
Adu03g00300 339 SUPERFAMILY Homeodomain-like 132 191 IPR009057 -
Adu03g00300 339 MobiDBLite consensus disorder prediction 199 240 - -
Adu03g00300 339 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 275 IPR044841 GO:0003700|GO:0006355
Adu03g00300 339 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00300 Adu-Chr3 2740370 2741870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00300 1 267 G2-like Transcription Factor Family AT3G46640 52.069 1.15e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu03g00300 Myb_DNA-binding 1.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00300 - - zju:107411020 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00300 03 2740370 2741870 Adu03g00300 03 2740370 2741870 ECH