Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00289 ATGGATCCAAATTATCCTATAGGCGGCAGTGATGATTTCATGAACAGCTTCCAAATTGGTGAAGATGGCACCATAATATTCTCTGATGATCAAAATCAGTTTTATTATGATGCCAACCAACACCTTGATCCTCTTTACCAGCATGTTGCAGACCAACTTTTTGATGAATTTCCTCAGTACACAAGCTATGTGGAAGAAGCTGCAGCTGCTCCTGTTGCCTCCACCGCGGTGGATCCTTCTGTTGAGGACGCTGATTTCTCAGAAACAGCAAAGTTTATAACACAAGTTCTCATGGAAGAGGGTGTTGAACAAAGGCCATTCTATGACCCTTTCAGCTTGAATGCCACTGAGCAATCCTTCTATGATGCTCTTAACGATGTTCTCATAGACAACATCAACTTGCCACTCTCCCCCAATGAACACCCTCTTGATGTTCATCATCAAGGTGGAACAACCAGCAGCAGCAGCAGCGGCAGCAACAGTGGCAACAACAACGACAATCAAAACAATAACAACCCTGTTGATGAGAACTCTAGCGAGTTTCTGAAGCCTTCTGTTTCTCCTGATACCTTTACCTCTGGTGATCATCCTTTTCAGTTTAACTCCCATGCCATTTCTCAACATGACTCGAATGCTTCCTATGTTACTAATTTTGGTGTGTATGATGTGGATACTTCTTTTACCAAGTTGTTGGCTCAAAATATTTTCAGCGACTCAGATTCTGTCTCCCAGTTCAGGAGAGGCTTAGAGGAAGCTAGCAAGTTTCTTCCTCCGGGACCTCAGCTTGTGACTGGTTTTGAGACCACACCGGCTGTCGCTGTGCCTATAGACGAACTAAAGGGAGATAAAGCCGTTGGGTTAAAGGGCAGAAAGAATCATGAACGTGAAGAATGGAGTGATGATACAGAAGAAGGGAGGAGTAACAAGCATTCGGCAACTAGCAGTGTAGTTGATGAGAGTGAATTATCTGAAATGTTTGATAAAGTATTGCTTAGTATTGGTGCCCCAATGTGCTTTCCAGTAAACAATGAAGTAGAGAAAGCTTCTAATCCCTCAACCTCTAATGGAGGGAAGGGTCGTCCTAAGAGACAAGGGAAGAAGAAGGAAACCATTGATTTGAGGACCCTTTTGGTTCTGTGTGCACAAGCTGTATCTGCTTGTGACAACAGGACTGCCACTGAGCTTCTCAAGCAAATTAGGCAGCATTCGACTCCCTCTGGGGATGCAACGCAAAGAACGGCTCATTACTTCGCCAATGGCCTTGAAGCACGCTTGCATGGTGATGGCACTGGAACACAAGGATTCTACACCTATGTCAGCACCAAGAGGCTAAGTGCTGCTGAGTTTTTGAAAGCTTACAAGGTGTTCATGAGTGCCTGCCCTTTTTCGAAGTTTGCAAATTTCTTTGCAAACAAGATGATAATGAAAGCTGCTCAAAATGCAGAAACACTTCACATCATTGATTTTGGTATCTTATATGGTTTCCAGTGGCCAATTCTGATTAAGTTCCTCTCAGACAGAGAAACTGGACCCCTCAAGAAGCTGAAGATCACAGGAATAGAGTTTCCCCAACCTGGTTTCCGTCCTGCAGAAAGACTTCACGAGACTGGTCGTCGTCTTGCTAACTACTGCGAGCGTTTCAAGGTTCCCTTCGAGTATAATGCCATAGCATCAAGGAACTGGGAAACCATCCAGGTTGAAGACCTTAAAATTGAGAGCAATGAGTTTCTTGCTGTGAACTGTCATAAGAGGTTTGAGAATTTGATGGATGAAACAATTGAAGTGAACAGTCCTAGAGATGCAGTGTTGCAGTTGATCAGGAAGATAAATCCGGATATTTTTGTTCAGGCCATTGTTAATGGATCTTATAATGCACCTTTCTTTGCCACACGATTCAGGGAGGCACTGTTCCATTTTTCTGCAATTTATGACATGTGTGATGCTGTCATCCCCCGTGACAATGAGAAGAGAATGAAGATTGAGAGAGAGATTATAGGCCGGGAGGTTTTGAATGTTGTGGCGTGCGAAGGTTTTGAAAGGATTGATAGGCCTGAGACATACAAGCAATGGCAGGCTAGGAATACAAGGGCTGGTTTCAAGCAGCTTCCCTTGAATGAGGAGCTAATGGCCAAATTTTCAGCCAAGTTAAAGGAATGGTACCACAAAGACTTTGTCTTCGATGAGGATGGCAACTGGATGCTTCAAGGTTGGAAGGGCCGCGTCTTATACGCTTCCACTTGTTGGGTGCCTGCATAG 2256 0.4415 MDPNYPIGGSDDFMNSFQIGEDGTIIFSDDQNQFYYDANQHLDPLYQHVADQLFDEFPQYTSYVEEAAAAPVASTAVDPSVEDADFSETAKFITQVLMEEGVEQRPFYDPFSLNATEQSFYDALNDVLIDNINLPLSPNEHPLDVHHQGGTTSSSSSGSNSGNNNDNQNNNNPVDENSSEFLKPSVSPDTFTSGDHPFQFNSHAISQHDSNASYVTNFGVYDVDTSFTKLLAQNIFSDSDSVSQFRRGLEEASKFLPPGPQLVTGFETTPAVAVPIDELKGDKAVGLKGRKNHEREEWSDDTEEGRSNKHSATSSVVDESELSEMFDKVLLSIGAPMCFPVNNEVEKASNPSTSNGGKGRPKRQGKKKETIDLRTLLVLCAQAVSACDNRTATELLKQIRQHSTPSGDATQRTAHYFANGLEARLHGDGTGTQGFYTYVSTKRLSAAEFLKAYKVFMSACPFSKFANFFANKMIMKAAQNAETLHIIDFGILYGFQWPILIKFLSDRETGPLKKLKITGIEFPQPGFRPAERLHETGRRLANYCERFKVPFEYNAIASRNWETIQVEDLKIESNEFLAVNCHKRFENLMDETIEVNSPRDAVLQLIRKINPDIFVQAIVNGSYNAPFFATRFREALFHFSAIYDMCDAVIPRDNEKRMKIEREIIGREVLNVVACEGFERIDRPETYKQWQARNTRAGFKQLPLNEELMAKFSAKLKEWYHKDFVFDEDGNWMLQGWKGRVLYASTCWVPA 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00289 751 MobiDBLite consensus disorder prediction 146 195 - -
Adu03g00289 751 MobiDBLite consensus disorder prediction 287 318 - -
Adu03g00289 751 MobiDBLite consensus disorder prediction 139 195 - -
Adu03g00289 751 MobiDBLite consensus disorder prediction 287 308 - -
Adu03g00289 751 MobiDBLite consensus disorder prediction 344 367 - -
Adu03g00289 751 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 75 750 - -
Adu03g00289 751 MobiDBLite consensus disorder prediction 345 359 - -
Adu03g00289 751 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 75 750 IPR005202 -
Adu03g00289 751 Pfam GRAS domain family 373 748 IPR005202 -
Adu03g00289 751 ProSiteProfiles GRAS family profile. 364 749 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00289 Adu-Chr3 2646285 2649785 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00289 91 751 GRAS Transcription Factor Family AT1G07530 48.664 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu03g00289 GRAS 7.9e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00289 - - adu:107476834 1470.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00289 03 2646285 2649785 Adu03g00289 03 2646285 2649785 ECH
Adu03g00289 03 2646285 2649785 Adu08g01229 08 21364050 21366866 PCT