Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g00280 ATGAAGTGCTTCCACTTCCCAAGCATCGAAAGAGACCACCGGCGAGACTACGACAACGAAGACGGCGTCGTTTCAAGCAGCTGCAGAACCTCAAGGGTCTCATGGGCCCGCTCCCTCAGCGTCGCTTCCTCAACCCTCGTTCGCAACTCCGAGTTCGACGACACCGACTCTTCCTTCAACGACACCCTCGCTTTCCATGACTTCCTCTCTCTCCGTCGCGCCAACAACCTCCTTCTCTTCTCATTCTCTCAGCTCAAAACCGCCACTCGCGGATTCAGCAGGGCCCTCTTGATCGGCGAGGGTGGCTTCGGCCCCGTCTACAGGGGGACCCTTTCTGTTCCTGATGACGGTGACGGTGACGGTGACGGTCTTTCAGAGGTGCAGATGGAGGTTGCAATTAAGCAGCTGAATCGTAACGGCCACCAGGGGCATAAAGAGTGGATCAATGAAGTGAACTTGTTGGGTGTGATCAAGCATCCGAATCTCGTGAGGTTGGTGGGGTATTGTGCAGAGGATGATGAAAGAGGGATTCAAAGACTTCTTGTGTATGAACTTATGCCTAATAAGAGCTTGGAAGACCATCTTCTGGCTCGAGTCTCATCGATGTCAACGCTACCATGGACCACGAGATTAAAAATTGCTCAAGATGCAGCTCGCGGTTTGGCATACCTTCATGAAGAAATGGATTTTCAGGTTGTTGGTACCATAGGTTATGCTGCACCAGAGTATGTTCAGACTGGTAAGCTGACTGCAAAGAGTGATGTATGGAGCTTCGGTGTAGTTCTTTACGAGCTTATCACTGGTAGGAGAGCTGTAGAACGGAACCTACCCAGAAATGAACAGAGGCTCTTGGAGTGGGTAAGACCTTATGTTTCTGATCCTAGGAAGTTCCATGTTATAGTAGACCCAAAACTTGAAGGACAATATTGCATGAAATCAGCTCAAAAGCTTGCTACTCTAGCAAACAAGTGCCTCATGAAGCAGCCTAAGTCACGTCCGAAAATGAGTGACGTGGTTGAGTTTCTTGCAAACATTCTCAATGATACTATTCAGGAAGAAAGCATCCCTCAAGCTGTTGTACCCAACGGAGAAGAGAAAGTGAAGCCATCATCTGTCAAGGACATAGAACCTGAACCAGCTGCTAAGCAAGGGAACAATTATCTGAAGAAGGTTTTTGAGTTTAGAGACATGGTGAGCTTAAGAAACAAGTCCATTGGAAGGTTAGATTGGAAAAATTGGGCACCTGGGCTTGTAAGAACTTGGTGA 1266 0.4834 MKCFHFPSIERDHRRDYDNEDGVVSSSCRTSRVSWARSLSVASSTLVRNSEFDDTDSSFNDTLAFHDFLSLRRANNLLLFSFSQLKTATRGFSRALLIGEGGFGPVYRGTLSVPDDGDGDGDGLSEVQMEVAIKQLNRNGHQGHKEWINEVNLLGVIKHPNLVRLVGYCAEDDERGIQRLLVYELMPNKSLEDHLLARVSSMSTLPWTTRLKIAQDAARGLAYLHEEMDFQVVGTIGYAAPEYVQTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQRLLEWVRPYVSDPRKFHVIVDPKLEGQYCMKSAQKLATLANKCLMKQPKSRPKMSDVVEFLANILNDTIQEESIPQAVVPNGEEKVKPSSVKDIEPEPAAKQGNNYLKKVFEFRDMVSLRNKSIGRLDWKNWAPGLVRTW 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g00280 421 ProSiteProfiles Protein kinase domain profile. 92 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g00280 421 PANTHER OS01G0588500 PROTEIN-RELATED 36 233 - -
Adu03g00280 421 PANTHER OS01G0588500 PROTEIN-RELATED 232 353 - -
Adu03g00280 421 Pfam Protein kinase domain 231 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g00280 421 Pfam Protein tyrosine and serine/threonine kinase 98 227 IPR001245 GO:0004672|GO:0006468
Adu03g00280 421 Gene3D Transferase(Phosphotransferase) domain 1 229 361 - -
Adu03g00280 421 SUPERFAMILY Protein kinase-like (PK-like) 73 342 IPR011009 -
Adu03g00280 421 Gene3D Phosphorylase Kinase; domain 1 62 185 - -
Adu03g00280 421 Gene3D Transferase(Phosphotransferase) domain 1 186 228 - -
Adu03g00280 421 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 36 233 - -
Adu03g00280 421 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 232 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g00280 Adu-Chr3 2565912 2568916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g00280 80 394 Glycoside Hydrolase AT3G07070 39.888 4.39e-73 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Adu03g00280 PK_Tyr_Ser-Thr 1.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g00280 - - gmx:100305425 580.482